Gene : Phvul.002G051100 P. vulgaris v2.1
Defline:  (1 of 3) K02969 - small subunit ribosomal protein S20e (RP-S20e, RPS20) Genomic Order:  510
Name:  ? Phvul.002G051100 Secondary Identifier:  ? PAC:37175719
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G051100 0.5kb upstream 0.5kb upstream 2134 true Chr02: 4708915-4711048 Phaseolus vulgaris
Phvul.002G051100 0.5kb upstream 0.5kb upstream 500 false Chr02: 4708915-4709414 Phaseolus vulgaris
Phvul.002G051100 0.5kb downstream 0.5kb downstream 2134 true Chr02: 4709415-4711548 Phaseolus vulgaris
Phvul.002G051100 0.5kb downstream 0.5kb downstream 500 false Chr02: 4711049-4711548 Phaseolus vulgaris
Phvul.002G051100 1.0kb upstream 1.0kb upstream 2634 true Chr02: 4708415-4711048 Phaseolus vulgaris
Phvul.002G051100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4708415-4709414 Phaseolus vulgaris
Phvul.002G051100 1.0kb downstream 1.0kb downstream 2634 true Chr02: 4709415-4712048 Phaseolus vulgaris
Phvul.002G051100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4711049-4712048 Phaseolus vulgaris
Phvul.002G051100 2.0kb upstream 2.0kb upstream 3634 true Chr02: 4707415-4711048 Phaseolus vulgaris
Phvul.002G051100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4707415-4709414 Phaseolus vulgaris
Phvul.002G051100 2.0kb downstream 2.0kb downstream 3634 true Chr02: 4709415-4713048 Phaseolus vulgaris
Phvul.002G051100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4711049-4713048 Phaseolus vulgaris
Phvul.002G051100 5.0kb upstream 5.0kb upstream 6634 true Chr02: 4704415-4711048 Phaseolus vulgaris
Phvul.002G051100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4704415-4709414 Phaseolus vulgaris
Phvul.002G051100 5.0kb downstream 5.0kb downstream 6634 true Chr02: 4709415-4716048 Phaseolus vulgaris
Phvul.002G051100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4711049-4716048 Phaseolus vulgaris
Phvul.002G051100 10.0kb upstream 10.0kb upstream 11634 true Chr02: 4699415-4711048 Phaseolus vulgaris
Phvul.002G051100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4699415-4709414 Phaseolus vulgaris
Phvul.002G051100 10.0kb downstream 10.0kb downstream 11634 true Chr02: 4709415-4721048 Phaseolus vulgaris
Phvul.002G051100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4711049-4721048 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.4555 0.0 110.546 High  
cufflinks 64.7184 0.0 167.316 High  
cufflinks 26.4127 0.0 70.5138    
cufflinks 66.0077 0.0 170.668 High  
cufflinks 50.2296 0.0 130.091 High  
cufflinks 24.6203 0.0 65.9983    
cufflinks 38.3791 0.0 99.9104 High  
cufflinks 48.0055 0.0 124.324 High  
cufflinks 66.4761 0.0 172.037 High  
cufflinks 9.34555 0.0 27.5535   Low
cufflinks 41.2131 0.0 107.225 High  

0 Strain