Gene : Phvul.002G051600 P. vulgaris v2.1
Defline:  (1 of 1) K03511 - DNA polymerase kappa (POLK) Genomic Order:  515
Name:  ? Phvul.002G051600 Secondary Identifier:  ? PAC:37175830
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G051600 0.5kb upstream 0.5kb upstream 5201 true Chr02: 4743004-4748204 Phaseolus vulgaris
Phvul.002G051600 0.5kb upstream 0.5kb upstream 500 false Chr02: 4743004-4743503 Phaseolus vulgaris
Phvul.002G051600 0.5kb downstream 0.5kb downstream 5201 true Chr02: 4743504-4748704 Phaseolus vulgaris
Phvul.002G051600 0.5kb downstream 0.5kb downstream 500 false Chr02: 4748205-4748704 Phaseolus vulgaris
Phvul.002G051600 1.0kb upstream 1.0kb upstream 5701 true Chr02: 4742504-4748204 Phaseolus vulgaris
Phvul.002G051600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4742504-4743503 Phaseolus vulgaris
Phvul.002G051600 1.0kb downstream 1.0kb downstream 5701 true Chr02: 4743504-4749204 Phaseolus vulgaris
Phvul.002G051600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4748205-4749204 Phaseolus vulgaris
Phvul.002G051600 2.0kb upstream 2.0kb upstream 6701 true Chr02: 4741504-4748204 Phaseolus vulgaris
Phvul.002G051600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4741504-4743503 Phaseolus vulgaris
Phvul.002G051600 2.0kb downstream 2.0kb downstream 6701 true Chr02: 4743504-4750204 Phaseolus vulgaris
Phvul.002G051600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4748205-4750204 Phaseolus vulgaris
Phvul.002G051600 5.0kb upstream 5.0kb upstream 9701 true Chr02: 4738504-4748204 Phaseolus vulgaris
Phvul.002G051600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4738504-4743503 Phaseolus vulgaris
Phvul.002G051600 5.0kb downstream 5.0kb downstream 9701 true Chr02: 4743504-4753204 Phaseolus vulgaris
Phvul.002G051600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4748205-4753204 Phaseolus vulgaris
Phvul.002G051600 10.0kb upstream 10.0kb upstream 14701 true Chr02: 4733504-4748204 Phaseolus vulgaris
Phvul.002G051600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4733504-4743503 Phaseolus vulgaris
Phvul.002G051600 10.0kb downstream 10.0kb downstream 14701 true Chr02: 4743504-4758204 Phaseolus vulgaris
Phvul.002G051600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4748205-4758204 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299445 5265 Fabidae View MSA
124064491 5270 Rosid View MSA
123752653 5271 Pentapetalae View MSA
122794532 5272 Eudicot View MSA
122043377 5273 Angiosperm View MSA
121348384 5274 Embryophyte View MSA
123428686 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01209 0.0 8.33679   Low
cufflinks 2.58949 0.0 10.2113    
cufflinks 5.40056 0.0 20.3619    
cufflinks 1.53232 0.0 5.33461   Low
cufflinks 3.70864 0.0 13.6028    
cufflinks 3.15333 0.0 11.7851    
cufflinks 4.79223 0.0 16.152    
cufflinks 9.28818 0.0 31.5067   High
cufflinks 4.76846 0.0 16.1815    
cufflinks 4.71565 0.0 18.4826    
cufflinks 3.1067 0.0 11.7371    

0 Strain