Gene : Phvul.002G053700 P. vulgaris v2.1
Defline:  (1 of 1) K16573 - gamma-tubulin complex component 6 (TUBGCP6, GCP6) Genomic Order:  536
Name:  ? Phvul.002G053700 Secondary Identifier:  ? PAC:37175031
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G053700 0.5kb upstream 0.5kb upstream 15919 true Chr02: 4873193-4889111 Phaseolus vulgaris
Phvul.002G053700 0.5kb upstream 0.5kb upstream 500 false Chr02: 4873193-4873692 Phaseolus vulgaris
Phvul.002G053700 0.5kb downstream 0.5kb downstream 15919 true Chr02: 4873693-4889611 Phaseolus vulgaris
Phvul.002G053700 0.5kb downstream 0.5kb downstream 500 false Chr02: 4889112-4889611 Phaseolus vulgaris
Phvul.002G053700 1.0kb upstream 1.0kb upstream 16419 true Chr02: 4872693-4889111 Phaseolus vulgaris
Phvul.002G053700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4872693-4873692 Phaseolus vulgaris
Phvul.002G053700 1.0kb downstream 1.0kb downstream 16419 true Chr02: 4873693-4890111 Phaseolus vulgaris
Phvul.002G053700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4889112-4890111 Phaseolus vulgaris
Phvul.002G053700 2.0kb upstream 2.0kb upstream 17419 true Chr02: 4871693-4889111 Phaseolus vulgaris
Phvul.002G053700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4871693-4873692 Phaseolus vulgaris
Phvul.002G053700 2.0kb downstream 2.0kb downstream 17419 true Chr02: 4873693-4891111 Phaseolus vulgaris
Phvul.002G053700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4889112-4891111 Phaseolus vulgaris
Phvul.002G053700 5.0kb upstream 5.0kb upstream 20419 true Chr02: 4868693-4889111 Phaseolus vulgaris
Phvul.002G053700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4868693-4873692 Phaseolus vulgaris
Phvul.002G053700 5.0kb downstream 5.0kb downstream 20419 true Chr02: 4873693-4894111 Phaseolus vulgaris
Phvul.002G053700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4889112-4894111 Phaseolus vulgaris
Phvul.002G053700 10.0kb upstream 10.0kb upstream 25419 true Chr02: 4863693-4889111 Phaseolus vulgaris
Phvul.002G053700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4863693-4873692 Phaseolus vulgaris
Phvul.002G053700 10.0kb downstream 10.0kb downstream 25419 true Chr02: 4873693-4899111 Phaseolus vulgaris
Phvul.002G053700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4889112-4899111 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041339 5273 Angiosperm View MSA
122305364 5265 Fabidae View MSA
124064972 5270 Rosid View MSA
123740029 5271 Pentapetalae View MSA
122789951 5272 Eudicot View MSA
121345944 5274 Embryophyte View MSA
123428052 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.903534 0.0 2.86857   Low
cufflinks 1.96512 0.0 5.71873    
cufflinks 1.92637 0.0 5.59382    
cufflinks 1.33827 0.0 4.11068    
cufflinks 2.62104 0.0 7.44491    
cufflinks 2.86344 0.0 8.02275   High
cufflinks 2.99513 0.0 8.37866   High
cufflinks 2.16693 0.0 6.21429    
cufflinks 2.6543 0.0 7.5366    
cufflinks 1.03707 0.0 3.24868   Low
cufflinks 1.71919 0.0 5.11147    

0 Strain