Gene : Phvul.002G174800 P. vulgaris v2.1
Defline:  (1 of 1) K01228 - mannosyl-oligosaccharide glucosidase (GCS1) Genomic Order:  1727
Name:  ? Phvul.002G174800 Secondary Identifier:  ? PAC:37174755
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G174800 0.5kb upstream 0.5kb upstream 12290 true Chr02: 33233109-33245398 Phaseolus vulgaris
Phvul.002G174800 0.5kb upstream 0.5kb upstream 500 false Chr02: 33244899-33245398 Phaseolus vulgaris
Phvul.002G174800 0.5kb downstream 0.5kb downstream 12290 true Chr02: 33232609-33244898 Phaseolus vulgaris
Phvul.002G174800 0.5kb downstream 0.5kb downstream 500 false Chr02: 33232609-33233108 Phaseolus vulgaris
Phvul.002G174800 1.0kb upstream 1.0kb upstream 12790 true Chr02: 33233109-33245898 Phaseolus vulgaris
Phvul.002G174800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 33244899-33245898 Phaseolus vulgaris
Phvul.002G174800 1.0kb downstream 1.0kb downstream 12790 true Chr02: 33232109-33244898 Phaseolus vulgaris
Phvul.002G174800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 33232109-33233108 Phaseolus vulgaris
Phvul.002G174800 2.0kb upstream 2.0kb upstream 13790 true Chr02: 33233109-33246898 Phaseolus vulgaris
Phvul.002G174800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 33244899-33246898 Phaseolus vulgaris
Phvul.002G174800 2.0kb downstream 2.0kb downstream 13790 true Chr02: 33231109-33244898 Phaseolus vulgaris
Phvul.002G174800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 33231109-33233108 Phaseolus vulgaris
Phvul.002G174800 5.0kb upstream 5.0kb upstream 16790 true Chr02: 33233109-33249898 Phaseolus vulgaris
Phvul.002G174800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 33244899-33249898 Phaseolus vulgaris
Phvul.002G174800 5.0kb downstream 5.0kb downstream 16790 true Chr02: 33228109-33244898 Phaseolus vulgaris
Phvul.002G174800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 33228109-33233108 Phaseolus vulgaris
Phvul.002G174800 10.0kb upstream 10.0kb upstream 21790 true Chr02: 33233109-33254898 Phaseolus vulgaris
Phvul.002G174800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 33244899-33254898 Phaseolus vulgaris
Phvul.002G174800 10.0kb downstream 10.0kb downstream 21790 true Chr02: 33223109-33244898 Phaseolus vulgaris
Phvul.002G174800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 33223109-33233108 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302510 5265 Fabidae View MSA
124063945 5270 Rosid View MSA
123740245 5271 Pentapetalae View MSA
122793215 5272 Eudicot View MSA
122042619 5273 Angiosperm View MSA
121344723 5274 Embryophyte View MSA
123423792 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.91143 0.0 15.7996   Low
cufflinks 12.2254 0.0 31.6205    
cufflinks 11.1992 0.0 29.0055    
cufflinks 9.55816 0.0 24.9148    
cufflinks 9.22004 0.0 24.0858    
cufflinks 8.26803 0.0 21.6271    
cufflinks 11.8553 0.0 30.677    
cufflinks 12.3318 0.0 31.8828    
cufflinks 13.6955 0.0 35.4015    
cufflinks 20.3894 0.0 53.0498   High
cufflinks 8.8557 0.0 23.1477    

0 Strain