Gene : Phvul.002G170700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31499:SF11 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  1714
Name:  ? Phvul.002G170700 Secondary Identifier:  ? PAC:37178781
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G170700 0.5kb upstream 0.5kb upstream 2463 true Chr02: 32842539-32845001 Phaseolus vulgaris
Phvul.002G170700 0.5kb upstream 0.5kb upstream 500 false Chr02: 32844502-32845001 Phaseolus vulgaris
Phvul.002G170700 0.5kb downstream 0.5kb downstream 2463 true Chr02: 32842039-32844501 Phaseolus vulgaris
Phvul.002G170700 0.5kb downstream 0.5kb downstream 500 false Chr02: 32842039-32842538 Phaseolus vulgaris
Phvul.002G170700 1.0kb upstream 1.0kb upstream 2963 true Chr02: 32842539-32845501 Phaseolus vulgaris
Phvul.002G170700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32844502-32845501 Phaseolus vulgaris
Phvul.002G170700 1.0kb downstream 1.0kb downstream 2963 true Chr02: 32841539-32844501 Phaseolus vulgaris
Phvul.002G170700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32841539-32842538 Phaseolus vulgaris
Phvul.002G170700 2.0kb upstream 2.0kb upstream 3963 true Chr02: 32842539-32846501 Phaseolus vulgaris
Phvul.002G170700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32844502-32846501 Phaseolus vulgaris
Phvul.002G170700 2.0kb downstream 2.0kb downstream 3963 true Chr02: 32840539-32844501 Phaseolus vulgaris
Phvul.002G170700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32840539-32842538 Phaseolus vulgaris
Phvul.002G170700 5.0kb upstream 5.0kb upstream 6963 true Chr02: 32842539-32849501 Phaseolus vulgaris
Phvul.002G170700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32844502-32849501 Phaseolus vulgaris
Phvul.002G170700 5.0kb downstream 5.0kb downstream 6963 true Chr02: 32837539-32844501 Phaseolus vulgaris
Phvul.002G170700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32837539-32842538 Phaseolus vulgaris
Phvul.002G170700 10.0kb upstream 10.0kb upstream 11963 true Chr02: 32842539-32854501 Phaseolus vulgaris
Phvul.002G170700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32844502-32854501 Phaseolus vulgaris
Phvul.002G170700 10.0kb downstream 10.0kb downstream 11963 true Chr02: 32832539-32844501 Phaseolus vulgaris
Phvul.002G170700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32832539-32842538 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791710 5273 Angiosperm View MSA
122309640 5265 Fabidae View MSA
124067697 5270 Rosid View MSA
123742453 5271 Pentapetalae View MSA
122786457 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.2154 0.0 19.6273    
cufflinks 2.26535 0.0 10.389    
cufflinks 4.40763 0.0 16.5966    
cufflinks 1.24493 0.0 6.66841   Low
cufflinks 5.10611 0.0 19.6206    
cufflinks 4.74962 0.0 18.6191    
cufflinks 7.63417 0.0 25.5196    
cufflinks 6.7757 0.0 22.8546    
cufflinks 5.9538 0.0 22.5561    
cufflinks 0.589207 0.0 3.71597   Low
cufflinks 5.90357 0.0 21.4764    

0 Strain