Gene : Phvul.002G176000 P. vulgaris v2.1
Defline:  (1 of 1) K10730 - ATP-dependent DNA helicase Q4 [EC:3.6.4.12] (RECQL4) Genomic Order:  1739
Name:  ? Phvul.002G176000 Secondary Identifier:  ? PAC:37174865
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G176000 0.5kb upstream 0.5kb upstream 10134 true Chr02: 33423604-33433737 Phaseolus vulgaris
Phvul.002G176000 0.5kb upstream 0.5kb upstream 500 false Chr02: 33433238-33433737 Phaseolus vulgaris
Phvul.002G176000 0.5kb downstream 0.5kb downstream 10134 true Chr02: 33423104-33433237 Phaseolus vulgaris
Phvul.002G176000 0.5kb downstream 0.5kb downstream 500 false Chr02: 33423104-33423603 Phaseolus vulgaris
Phvul.002G176000 1.0kb upstream 1.0kb upstream 10634 true Chr02: 33423604-33434237 Phaseolus vulgaris
Phvul.002G176000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 33433238-33434237 Phaseolus vulgaris
Phvul.002G176000 1.0kb downstream 1.0kb downstream 10634 true Chr02: 33422604-33433237 Phaseolus vulgaris
Phvul.002G176000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 33422604-33423603 Phaseolus vulgaris
Phvul.002G176000 2.0kb upstream 2.0kb upstream 11634 true Chr02: 33423604-33435237 Phaseolus vulgaris
Phvul.002G176000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 33433238-33435237 Phaseolus vulgaris
Phvul.002G176000 2.0kb downstream 2.0kb downstream 11634 true Chr02: 33421604-33433237 Phaseolus vulgaris
Phvul.002G176000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 33421604-33423603 Phaseolus vulgaris
Phvul.002G176000 5.0kb upstream 5.0kb upstream 14634 true Chr02: 33423604-33438237 Phaseolus vulgaris
Phvul.002G176000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 33433238-33438237 Phaseolus vulgaris
Phvul.002G176000 5.0kb downstream 5.0kb downstream 14634 true Chr02: 33418604-33433237 Phaseolus vulgaris
Phvul.002G176000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 33418604-33423603 Phaseolus vulgaris
Phvul.002G176000 10.0kb upstream 10.0kb upstream 19634 true Chr02: 33423604-33443237 Phaseolus vulgaris
Phvul.002G176000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 33433238-33443237 Phaseolus vulgaris
Phvul.002G176000 10.0kb downstream 10.0kb downstream 19634 true Chr02: 33413604-33433237 Phaseolus vulgaris
Phvul.002G176000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 33413604-33423603 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309451 5265 Fabidae View MSA
124063497 5270 Rosid View MSA
123747334 5271 Pentapetalae View MSA
122787698 5272 Eudicot View MSA
122045833 5273 Angiosperm View MSA
121348099 5274 Embryophyte View MSA
123427743 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.376128 0.0 1.33686 Low Low
cufflinks 1.03768 0.0 3.30653    
cufflinks 0.940355 0.0 3.02692    
cufflinks 0.301055 0.0 1.09893 Low Low
cufflinks 1.3175 0.0 4.1078    
cufflinks 1.66813 0.0 5.0334    
cufflinks 2.55105 0.0 7.31723   High
cufflinks 1.84038 0.0 5.4671    
cufflinks 2.09147 0.0 6.15184    
cufflinks 0.170367 0.0 0.650451 Low Low
cufflinks 1.13273 0.0 3.58198    

0 Strain