Gene : Phvul.002G178200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR15835:SF6 - F20D23.9 PROTEIN Genomic Order:  1761
Name:  ? Phvul.002G178200 Secondary Identifier:  ? PAC:37178211
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G178200 0.5kb upstream 0.5kb upstream 16137 true Chr02: 33775673-33791809 Phaseolus vulgaris
Phvul.002G178200 0.5kb upstream 0.5kb upstream 500 false Chr02: 33791310-33791809 Phaseolus vulgaris
Phvul.002G178200 0.5kb downstream 0.5kb downstream 16137 true Chr02: 33775173-33791309 Phaseolus vulgaris
Phvul.002G178200 0.5kb downstream 0.5kb downstream 500 false Chr02: 33775173-33775672 Phaseolus vulgaris
Phvul.002G178200 1.0kb upstream 1.0kb upstream 16637 true Chr02: 33775673-33792309 Phaseolus vulgaris
Phvul.002G178200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 33791310-33792309 Phaseolus vulgaris
Phvul.002G178200 1.0kb downstream 1.0kb downstream 16637 true Chr02: 33774673-33791309 Phaseolus vulgaris
Phvul.002G178200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 33774673-33775672 Phaseolus vulgaris
Phvul.002G178200 2.0kb upstream 2.0kb upstream 17637 true Chr02: 33775673-33793309 Phaseolus vulgaris
Phvul.002G178200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 33791310-33793309 Phaseolus vulgaris
Phvul.002G178200 2.0kb downstream 2.0kb downstream 17637 true Chr02: 33773673-33791309 Phaseolus vulgaris
Phvul.002G178200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 33773673-33775672 Phaseolus vulgaris
Phvul.002G178200 5.0kb upstream 5.0kb upstream 20637 true Chr02: 33775673-33796309 Phaseolus vulgaris
Phvul.002G178200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 33791310-33796309 Phaseolus vulgaris
Phvul.002G178200 5.0kb downstream 5.0kb downstream 20637 true Chr02: 33770673-33791309 Phaseolus vulgaris
Phvul.002G178200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 33770673-33775672 Phaseolus vulgaris
Phvul.002G178200 10.0kb upstream 10.0kb upstream 25637 true Chr02: 33775673-33801309 Phaseolus vulgaris
Phvul.002G178200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 33791310-33801309 Phaseolus vulgaris
Phvul.002G178200 10.0kb downstream 10.0kb downstream 25637 true Chr02: 33765673-33791309 Phaseolus vulgaris
Phvul.002G178200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 33765673-33775672 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306161 5265 Fabidae View MSA
124065302 5270 Rosid View MSA
123751244 5271 Pentapetalae View MSA
122788021 5272 Eudicot View MSA
122045588 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.36444 0.0 15.6632   Low
cufflinks 6.60727 0.0 29.4096    
cufflinks 10.7708 0.0 46.3016    
cufflinks 4.03117 0.0 17.0878   Low
cufflinks 7.37752 0.0 31.2779    
cufflinks 11.1342 0.0 44.5285    
cufflinks 8.86562 0.0 38.3057    
cufflinks 8.00365 0.0 36.5137    
cufflinks 8.83934 0.0 35.1178    
cufflinks 11.5167 0.0 58.6807   High
cufflinks 7.26188 0.0 34.7129    

0 Strain