Gene : Phvul.002G177500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11214:SF92 - BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  1754
Name:  ? Phvul.002G177500 Secondary Identifier:  ? PAC:37176445
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G177500 0.5kb upstream 0.5kb upstream 6400 true Chr02: 33632544-33638943 Phaseolus vulgaris
Phvul.002G177500 0.5kb upstream 0.5kb upstream 500 false Chr02: 33638444-33638943 Phaseolus vulgaris
Phvul.002G177500 0.5kb downstream 0.5kb downstream 6400 true Chr02: 33632044-33638443 Phaseolus vulgaris
Phvul.002G177500 0.5kb downstream 0.5kb downstream 500 false Chr02: 33632044-33632543 Phaseolus vulgaris
Phvul.002G177500 1.0kb upstream 1.0kb upstream 6900 true Chr02: 33632544-33639443 Phaseolus vulgaris
Phvul.002G177500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 33638444-33639443 Phaseolus vulgaris
Phvul.002G177500 1.0kb downstream 1.0kb downstream 6900 true Chr02: 33631544-33638443 Phaseolus vulgaris
Phvul.002G177500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 33631544-33632543 Phaseolus vulgaris
Phvul.002G177500 2.0kb upstream 2.0kb upstream 7900 true Chr02: 33632544-33640443 Phaseolus vulgaris
Phvul.002G177500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 33638444-33640443 Phaseolus vulgaris
Phvul.002G177500 2.0kb downstream 2.0kb downstream 7900 true Chr02: 33630544-33638443 Phaseolus vulgaris
Phvul.002G177500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 33630544-33632543 Phaseolus vulgaris
Phvul.002G177500 5.0kb upstream 5.0kb upstream 10900 true Chr02: 33632544-33643443 Phaseolus vulgaris
Phvul.002G177500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 33638444-33643443 Phaseolus vulgaris
Phvul.002G177500 5.0kb downstream 5.0kb downstream 10900 true Chr02: 33627544-33638443 Phaseolus vulgaris
Phvul.002G177500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 33627544-33632543 Phaseolus vulgaris
Phvul.002G177500 10.0kb upstream 10.0kb upstream 15900 true Chr02: 33632544-33648443 Phaseolus vulgaris
Phvul.002G177500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 33638444-33648443 Phaseolus vulgaris
Phvul.002G177500 10.0kb downstream 10.0kb downstream 15900 true Chr02: 33622544-33638443 Phaseolus vulgaris
Phvul.002G177500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 33622544-33632543 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306660 5265 Fabidae View MSA
124064746 5270 Rosid View MSA
123750268 5271 Pentapetalae View MSA
122792852 5272 Eudicot View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4947 0.0 29.7236   Low
cufflinks 21.0584 0.0 55.0104    
cufflinks 18.6782 0.0 48.604    
cufflinks 16.6448 0.0 43.0581    
cufflinks 22.9902 0.0 60.1415    
cufflinks 21.3098 0.0 55.7422    
cufflinks 20.1277 0.0 52.5341    
cufflinks 21.3888 0.0 56.0675    
cufflinks 24.8654 0.0 65.4219   High
cufflinks 18.2943 0.0 47.5173    
cufflinks 23.4728 0.0 61.5237    

0 Strain