Gene : Phvul.002G162900 P. vulgaris v2.1
Defline:  (1 of 1) K12869 - crooked neck (CRN, CRNKL1, CLF1, SYF3) Genomic Order:  1631
Name:  ? Phvul.002G162900 Secondary Identifier:  ? PAC:37177870
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G162900 0.5kb upstream 0.5kb upstream 7252 true Chr02: 31761241-31768492 Phaseolus vulgaris
Phvul.002G162900 0.5kb upstream 0.5kb upstream 500 false Chr02: 31761241-31761740 Phaseolus vulgaris
Phvul.002G162900 0.5kb downstream 0.5kb downstream 7252 true Chr02: 31761741-31768992 Phaseolus vulgaris
Phvul.002G162900 0.5kb downstream 0.5kb downstream 500 false Chr02: 31768493-31768992 Phaseolus vulgaris
Phvul.002G162900 1.0kb upstream 1.0kb upstream 7752 true Chr02: 31760741-31768492 Phaseolus vulgaris
Phvul.002G162900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31760741-31761740 Phaseolus vulgaris
Phvul.002G162900 1.0kb downstream 1.0kb downstream 7752 true Chr02: 31761741-31769492 Phaseolus vulgaris
Phvul.002G162900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31768493-31769492 Phaseolus vulgaris
Phvul.002G162900 2.0kb upstream 2.0kb upstream 8752 true Chr02: 31759741-31768492 Phaseolus vulgaris
Phvul.002G162900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31759741-31761740 Phaseolus vulgaris
Phvul.002G162900 2.0kb downstream 2.0kb downstream 8752 true Chr02: 31761741-31770492 Phaseolus vulgaris
Phvul.002G162900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31768493-31770492 Phaseolus vulgaris
Phvul.002G162900 5.0kb upstream 5.0kb upstream 11752 true Chr02: 31756741-31768492 Phaseolus vulgaris
Phvul.002G162900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31756741-31761740 Phaseolus vulgaris
Phvul.002G162900 5.0kb downstream 5.0kb downstream 11752 true Chr02: 31761741-31773492 Phaseolus vulgaris
Phvul.002G162900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31768493-31773492 Phaseolus vulgaris
Phvul.002G162900 10.0kb upstream 10.0kb upstream 16752 true Chr02: 31751741-31768492 Phaseolus vulgaris
Phvul.002G162900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31751741-31761740 Phaseolus vulgaris
Phvul.002G162900 10.0kb downstream 10.0kb downstream 16752 true Chr02: 31761741-31778492 Phaseolus vulgaris
Phvul.002G162900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31768493-31778492 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306800 5265 Fabidae View MSA
124066520 5270 Rosid View MSA
123747782 5271 Pentapetalae View MSA
122796524 5272 Eudicot View MSA
122043261 5273 Angiosperm View MSA
121344122 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.857 0.0 30.6742   Low
cufflinks 24.3669 0.0 64.0043   High
cufflinks 18.8288 0.0 48.8883    
cufflinks 11.3052 0.0 29.2994   Low
cufflinks 18.4576 0.0 47.8717    
cufflinks 20.9466 0.0 54.6356    
cufflinks 18.7068 0.0 48.6684    
cufflinks 17.0902 0.0 44.3148    
cufflinks 19.0388 0.0 49.5298    
cufflinks 23.7631 0.0 62.2939   High
cufflinks 20.5121 0.0 53.4546    

0 Strain