Gene : Phvul.002G165600 P. vulgaris v2.1
Defline:  (1 of 1) K03404 - magnesium chelatase subunit D (chlD, bchD) Genomic Order:  1658
Name:  ? Phvul.002G165600 Secondary Identifier:  ? PAC:37175501
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris CHLOROPHYLL-SYN Phaseolus vulgaris pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G165600 0.5kb upstream 0.5kb upstream 11956 true Chr02: 32011879-32023834 Phaseolus vulgaris
Phvul.002G165600 0.5kb upstream 0.5kb upstream 500 false Chr02: 32011879-32012378 Phaseolus vulgaris
Phvul.002G165600 0.5kb downstream 0.5kb downstream 11956 true Chr02: 32012379-32024334 Phaseolus vulgaris
Phvul.002G165600 0.5kb downstream 0.5kb downstream 500 false Chr02: 32023835-32024334 Phaseolus vulgaris
Phvul.002G165600 1.0kb upstream 1.0kb upstream 12456 true Chr02: 32011379-32023834 Phaseolus vulgaris
Phvul.002G165600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32011379-32012378 Phaseolus vulgaris
Phvul.002G165600 1.0kb downstream 1.0kb downstream 12456 true Chr02: 32012379-32024834 Phaseolus vulgaris
Phvul.002G165600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32023835-32024834 Phaseolus vulgaris
Phvul.002G165600 2.0kb upstream 2.0kb upstream 13456 true Chr02: 32010379-32023834 Phaseolus vulgaris
Phvul.002G165600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32010379-32012378 Phaseolus vulgaris
Phvul.002G165600 2.0kb downstream 2.0kb downstream 13456 true Chr02: 32012379-32025834 Phaseolus vulgaris
Phvul.002G165600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32023835-32025834 Phaseolus vulgaris
Phvul.002G165600 5.0kb upstream 5.0kb upstream 16456 true Chr02: 32007379-32023834 Phaseolus vulgaris
Phvul.002G165600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32007379-32012378 Phaseolus vulgaris
Phvul.002G165600 5.0kb downstream 5.0kb downstream 16456 true Chr02: 32012379-32028834 Phaseolus vulgaris
Phvul.002G165600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32023835-32028834 Phaseolus vulgaris
Phvul.002G165600 10.0kb upstream 10.0kb upstream 21456 true Chr02: 32002379-32023834 Phaseolus vulgaris
Phvul.002G165600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32002379-32012378 Phaseolus vulgaris
Phvul.002G165600 10.0kb downstream 10.0kb downstream 21456 true Chr02: 32012379-32033834 Phaseolus vulgaris
Phvul.002G165600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32023835-32033834 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026552 5273 Angiosperm View MSA
122304637 5265 Fabidae View MSA
124050211 5270 Rosid View MSA
123740767 5271 Pentapetalae View MSA
122793676 5272 Eudicot View MSA
121344824 5274 Embryophyte View MSA
123424530 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3781 0.0 34.5876    
cufflinks 20.4982 0.0 53.2653    
cufflinks 109.055 0.0 335.038 High High
cufflinks 10.3656 0.0 26.9896    
cufflinks 15.2252 0.0 39.3555    
cufflinks 70.8391 0.0 204.658 High High
cufflinks 3.74461 0.0 10.4055   Low
cufflinks 3.75466 0.0 10.4196   Low
cufflinks 4.26709 0.0 11.7376   Low
cufflinks 14.5752 0.0 37.6756    
cufflinks 9.91181 0.0 25.8285    

0 Strain