Gene : Phvul.002G165800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23070//PTHR23070:SF12 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  1660
Name:  ? Phvul.002G165800 Secondary Identifier:  ? PAC:37178245
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G165800 0.5kb upstream 0.5kb upstream 2017 true Chr02: 32049958-32051974 Phaseolus vulgaris
Phvul.002G165800 0.5kb upstream 0.5kb upstream 500 false Chr02: 32049958-32050457 Phaseolus vulgaris
Phvul.002G165800 0.5kb downstream 0.5kb downstream 2017 true Chr02: 32050458-32052474 Phaseolus vulgaris
Phvul.002G165800 0.5kb downstream 0.5kb downstream 500 false Chr02: 32051975-32052474 Phaseolus vulgaris
Phvul.002G165800 1.0kb upstream 1.0kb upstream 2517 true Chr02: 32049458-32051974 Phaseolus vulgaris
Phvul.002G165800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32049458-32050457 Phaseolus vulgaris
Phvul.002G165800 1.0kb downstream 1.0kb downstream 2517 true Chr02: 32050458-32052974 Phaseolus vulgaris
Phvul.002G165800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32051975-32052974 Phaseolus vulgaris
Phvul.002G165800 2.0kb upstream 2.0kb upstream 3517 true Chr02: 32048458-32051974 Phaseolus vulgaris
Phvul.002G165800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32048458-32050457 Phaseolus vulgaris
Phvul.002G165800 2.0kb downstream 2.0kb downstream 3517 true Chr02: 32050458-32053974 Phaseolus vulgaris
Phvul.002G165800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32051975-32053974 Phaseolus vulgaris
Phvul.002G165800 5.0kb upstream 5.0kb upstream 6517 true Chr02: 32045458-32051974 Phaseolus vulgaris
Phvul.002G165800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32045458-32050457 Phaseolus vulgaris
Phvul.002G165800 5.0kb downstream 5.0kb downstream 6517 true Chr02: 32050458-32056974 Phaseolus vulgaris
Phvul.002G165800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32051975-32056974 Phaseolus vulgaris
Phvul.002G165800 10.0kb upstream 10.0kb upstream 11517 true Chr02: 32040458-32051974 Phaseolus vulgaris
Phvul.002G165800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32040458-32050457 Phaseolus vulgaris
Phvul.002G165800 10.0kb downstream 10.0kb downstream 11517 true Chr02: 32050458-32061974 Phaseolus vulgaris
Phvul.002G165800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32051975-32061974 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315760 5265 Fabidae View MSA
124074026 5270 Rosid View MSA
123751190 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.326482 0.0 1.26632 Low  
cufflinks 2.13713 0.0 6.90487   High
cufflinks 0.079354 0.0 0.345863 Low  
cufflinks 0.0880144 0.0 0.38167 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0250662 0.0 0.122762 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0273556 0.0 0.132871 Low  
cufflinks 0.0244407 0.0 0.12064 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain