Gene : Phvul.002G166000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23070//PTHR23070:SF12 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  1662
Name:  ? Phvul.002G166000 Secondary Identifier:  ? PAC:37177819
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G166000 0.5kb upstream 0.5kb upstream 2395 true Chr02: 32058893-32061287 Phaseolus vulgaris
Phvul.002G166000 0.5kb upstream 0.5kb upstream 500 false Chr02: 32058893-32059392 Phaseolus vulgaris
Phvul.002G166000 0.5kb downstream 0.5kb downstream 2395 true Chr02: 32059393-32061787 Phaseolus vulgaris
Phvul.002G166000 0.5kb downstream 0.5kb downstream 500 false Chr02: 32061288-32061787 Phaseolus vulgaris
Phvul.002G166000 1.0kb upstream 1.0kb upstream 2895 true Chr02: 32058393-32061287 Phaseolus vulgaris
Phvul.002G166000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32058393-32059392 Phaseolus vulgaris
Phvul.002G166000 1.0kb downstream 1.0kb downstream 2895 true Chr02: 32059393-32062287 Phaseolus vulgaris
Phvul.002G166000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32061288-32062287 Phaseolus vulgaris
Phvul.002G166000 2.0kb upstream 2.0kb upstream 3895 true Chr02: 32057393-32061287 Phaseolus vulgaris
Phvul.002G166000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32057393-32059392 Phaseolus vulgaris
Phvul.002G166000 2.0kb downstream 2.0kb downstream 3895 true Chr02: 32059393-32063287 Phaseolus vulgaris
Phvul.002G166000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32061288-32063287 Phaseolus vulgaris
Phvul.002G166000 5.0kb upstream 5.0kb upstream 6895 true Chr02: 32054393-32061287 Phaseolus vulgaris
Phvul.002G166000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32054393-32059392 Phaseolus vulgaris
Phvul.002G166000 5.0kb downstream 5.0kb downstream 6895 true Chr02: 32059393-32066287 Phaseolus vulgaris
Phvul.002G166000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32061288-32066287 Phaseolus vulgaris
Phvul.002G166000 10.0kb upstream 10.0kb upstream 11895 true Chr02: 32049393-32061287 Phaseolus vulgaris
Phvul.002G166000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32049393-32059392 Phaseolus vulgaris
Phvul.002G166000 10.0kb downstream 10.0kb downstream 11895 true Chr02: 32059393-32071287 Phaseolus vulgaris
Phvul.002G166000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32061288-32071287 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657512 5273 Angiosperm View MSA
122297410 5265 Fabidae View MSA
124039441 5270 Rosid View MSA
123611319 5271 Pentapetalae View MSA
122645890 5272 Eudicot View MSA
120929553 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3335 0.0 52.6719    
cufflinks 10.8753 0.0 29.0606    
cufflinks 3.91846 0.0 11.5056   Low
cufflinks 12.6426 0.0 33.4793    
cufflinks 9.08116 0.0 24.6844    
cufflinks 8.21131 0.0 22.453    
cufflinks 23.3506 0.0 60.3616    
cufflinks 30.7438 0.0 79.6368 High High
cufflinks 15.0399 0.0 39.296    
cufflinks 1.94238 0.0 6.20144   Low
cufflinks 20.4775 0.0 53.0634    

0 Strain