Gene : Phvul.002G166100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23070//PTHR23070:SF12 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  1663
Name:  ? Phvul.002G166100 Secondary Identifier:  ? PAC:37177543
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G166100 0.5kb upstream 0.5kb upstream 2344 true Chr02: 32081287-32083630 Phaseolus vulgaris
Phvul.002G166100 0.5kb upstream 0.5kb upstream 500 false Chr02: 32081287-32081786 Phaseolus vulgaris
Phvul.002G166100 0.5kb downstream 0.5kb downstream 2344 true Chr02: 32081787-32084130 Phaseolus vulgaris
Phvul.002G166100 0.5kb downstream 0.5kb downstream 500 false Chr02: 32083631-32084130 Phaseolus vulgaris
Phvul.002G166100 1.0kb upstream 1.0kb upstream 2844 true Chr02: 32080787-32083630 Phaseolus vulgaris
Phvul.002G166100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32080787-32081786 Phaseolus vulgaris
Phvul.002G166100 1.0kb downstream 1.0kb downstream 2844 true Chr02: 32081787-32084630 Phaseolus vulgaris
Phvul.002G166100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32083631-32084630 Phaseolus vulgaris
Phvul.002G166100 2.0kb upstream 2.0kb upstream 3844 true Chr02: 32079787-32083630 Phaseolus vulgaris
Phvul.002G166100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32079787-32081786 Phaseolus vulgaris
Phvul.002G166100 2.0kb downstream 2.0kb downstream 3844 true Chr02: 32081787-32085630 Phaseolus vulgaris
Phvul.002G166100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32083631-32085630 Phaseolus vulgaris
Phvul.002G166100 5.0kb upstream 5.0kb upstream 6844 true Chr02: 32076787-32083630 Phaseolus vulgaris
Phvul.002G166100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32076787-32081786 Phaseolus vulgaris
Phvul.002G166100 5.0kb downstream 5.0kb downstream 6844 true Chr02: 32081787-32088630 Phaseolus vulgaris
Phvul.002G166100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32083631-32088630 Phaseolus vulgaris
Phvul.002G166100 10.0kb upstream 10.0kb upstream 11844 true Chr02: 32071787-32083630 Phaseolus vulgaris
Phvul.002G166100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32071787-32081786 Phaseolus vulgaris
Phvul.002G166100 10.0kb downstream 10.0kb downstream 11844 true Chr02: 32081787-32093630 Phaseolus vulgaris
Phvul.002G166100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32083631-32093630 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657512 5273 Angiosperm View MSA
122255315 5265 Fabidae View MSA
124039441 5270 Rosid View MSA
123611319 5271 Pentapetalae View MSA
122645890 5272 Eudicot View MSA
120929553 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2165 0.0 54.9806   High
cufflinks 6.29751 0.0 17.7226    
cufflinks 0.361204 0.0 1.36701 Low Low
cufflinks 14.6839 0.0 38.7577   High
cufflinks 1.77808 0.0 5.79344    
cufflinks 2.03206 0.0 6.46881    
cufflinks 5.93221 0.0 16.7612    
cufflinks 13.4779 0.0 35.5282    
cufflinks 0.823871 0.0 2.90635   Low
cufflinks 2.02061 0.0 6.45484    
cufflinks 8.72847 0.0 23.9469    

0 Strain