Gene : Phvul.002G169300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31741:SF3 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  1695
Name:  ? Phvul.002G169300 Secondary Identifier:  ? PAC:37177808
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G169300 0.5kb upstream 0.5kb upstream 12641 true Chr02: 32524920-32537560 Phaseolus vulgaris
Phvul.002G169300 0.5kb upstream 0.5kb upstream 500 false Chr02: 32524920-32525419 Phaseolus vulgaris
Phvul.002G169300 0.5kb downstream 0.5kb downstream 12641 true Chr02: 32525420-32538060 Phaseolus vulgaris
Phvul.002G169300 0.5kb downstream 0.5kb downstream 500 false Chr02: 32537561-32538060 Phaseolus vulgaris
Phvul.002G169300 1.0kb upstream 1.0kb upstream 13141 true Chr02: 32524420-32537560 Phaseolus vulgaris
Phvul.002G169300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32524420-32525419 Phaseolus vulgaris
Phvul.002G169300 1.0kb downstream 1.0kb downstream 13141 true Chr02: 32525420-32538560 Phaseolus vulgaris
Phvul.002G169300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32537561-32538560 Phaseolus vulgaris
Phvul.002G169300 2.0kb upstream 2.0kb upstream 14141 true Chr02: 32523420-32537560 Phaseolus vulgaris
Phvul.002G169300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32523420-32525419 Phaseolus vulgaris
Phvul.002G169300 2.0kb downstream 2.0kb downstream 14141 true Chr02: 32525420-32539560 Phaseolus vulgaris
Phvul.002G169300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32537561-32539560 Phaseolus vulgaris
Phvul.002G169300 5.0kb upstream 5.0kb upstream 17141 true Chr02: 32520420-32537560 Phaseolus vulgaris
Phvul.002G169300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32520420-32525419 Phaseolus vulgaris
Phvul.002G169300 5.0kb downstream 5.0kb downstream 17141 true Chr02: 32525420-32542560 Phaseolus vulgaris
Phvul.002G169300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32537561-32542560 Phaseolus vulgaris
Phvul.002G169300 10.0kb upstream 10.0kb upstream 22141 true Chr02: 32515420-32537560 Phaseolus vulgaris
Phvul.002G169300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32515420-32525419 Phaseolus vulgaris
Phvul.002G169300 10.0kb downstream 10.0kb downstream 22141 true Chr02: 32525420-32547560 Phaseolus vulgaris
Phvul.002G169300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32537561-32547560 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310707 5265 Fabidae View MSA
124072479 5270 Rosid View MSA
123747295 5271 Pentapetalae View MSA
122788549 5272 Eudicot View MSA
122046099 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.1061 0.0 13.6822    
cufflinks 2.38656 0.0 12.2703    
cufflinks 6.83003 0.0 41.0409   High
cufflinks 2.74609 0.0 11.569    
cufflinks 2.30345 0.0 10.6121    
cufflinks 4.40278 0.0 23.1665    
cufflinks 3.03084 0.0 9.51491    
cufflinks 3.47771 0.0 10.8507    
cufflinks 3.75476 0.0 11.3705    
cufflinks 1.72879 0.0 9.62631   Low
cufflinks 2.29916 0.0 9.72936    

0 Strain