Gene : Phvul.002G169200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22811:SF47 - EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1694
Name:  ? Phvul.002G169200 Secondary Identifier:  ? PAC:37175816
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G169200 0.5kb upstream 0.5kb upstream 2637 true Chr02: 32512672-32515308 Phaseolus vulgaris
Phvul.002G169200 0.5kb upstream 0.5kb upstream 500 false Chr02: 32514809-32515308 Phaseolus vulgaris
Phvul.002G169200 0.5kb downstream 0.5kb downstream 2637 true Chr02: 32512172-32514808 Phaseolus vulgaris
Phvul.002G169200 0.5kb downstream 0.5kb downstream 500 false Chr02: 32512172-32512671 Phaseolus vulgaris
Phvul.002G169200 1.0kb upstream 1.0kb upstream 3137 true Chr02: 32512672-32515808 Phaseolus vulgaris
Phvul.002G169200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32514809-32515808 Phaseolus vulgaris
Phvul.002G169200 1.0kb downstream 1.0kb downstream 3137 true Chr02: 32511672-32514808 Phaseolus vulgaris
Phvul.002G169200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32511672-32512671 Phaseolus vulgaris
Phvul.002G169200 2.0kb upstream 2.0kb upstream 4137 true Chr02: 32512672-32516808 Phaseolus vulgaris
Phvul.002G169200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32514809-32516808 Phaseolus vulgaris
Phvul.002G169200 2.0kb downstream 2.0kb downstream 4137 true Chr02: 32510672-32514808 Phaseolus vulgaris
Phvul.002G169200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32510672-32512671 Phaseolus vulgaris
Phvul.002G169200 5.0kb upstream 5.0kb upstream 7137 true Chr02: 32512672-32519808 Phaseolus vulgaris
Phvul.002G169200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32514809-32519808 Phaseolus vulgaris
Phvul.002G169200 5.0kb downstream 5.0kb downstream 7137 true Chr02: 32507672-32514808 Phaseolus vulgaris
Phvul.002G169200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32507672-32512671 Phaseolus vulgaris
Phvul.002G169200 10.0kb upstream 10.0kb upstream 12137 true Chr02: 32512672-32524808 Phaseolus vulgaris
Phvul.002G169200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32514809-32524808 Phaseolus vulgaris
Phvul.002G169200 10.0kb downstream 10.0kb downstream 12137 true Chr02: 32502672-32514808 Phaseolus vulgaris
Phvul.002G169200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32502672-32512671 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300146 5265 Fabidae View MSA
124070301 5270 Rosid View MSA
123742196 5271 Pentapetalae View MSA
122791106 5272 Eudicot View MSA
122049810 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.2424 0.0 167.022 High High
cufflinks 31.3338 0.0 81.6    
cufflinks 16.03 0.0 43.7487   Low
cufflinks 61.3563 0.0 159.214 High High
cufflinks 28.1948 0.0 73.9018    
cufflinks 19.0381 0.0 51.1166   Low
cufflinks 30.2326 0.0 78.7172 High  
cufflinks 44.6856 0.0 115.515 High  
cufflinks 41.9978 0.0 108.589 High  
cufflinks 32.1523 0.0 83.6786    
cufflinks 35.2661 0.0 91.5096 High  

0 Strain