Gene : Phvul.002G170100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12197:SF126 - SET DOMAIN PROTEIN 35 Genomic Order:  1720
Name:  ? Phvul.002G170100 Secondary Identifier:  ? PAC:37177256
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G170100 0.5kb upstream 0.5kb upstream 2413 true Chr02: 33093248-33095660 Phaseolus vulgaris
Phvul.002G170100 0.5kb upstream 0.5kb upstream 500 false Chr02: 33095161-33095660 Phaseolus vulgaris
Phvul.002G170100 0.5kb downstream 0.5kb downstream 2413 true Chr02: 33092748-33095160 Phaseolus vulgaris
Phvul.002G170100 0.5kb downstream 0.5kb downstream 500 false Chr02: 33092748-33093247 Phaseolus vulgaris
Phvul.002G170100 1.0kb upstream 1.0kb upstream 2913 true Chr02: 33093248-33096160 Phaseolus vulgaris
Phvul.002G170100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 33095161-33096160 Phaseolus vulgaris
Phvul.002G170100 1.0kb downstream 1.0kb downstream 2913 true Chr02: 33092248-33095160 Phaseolus vulgaris
Phvul.002G170100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 33092248-33093247 Phaseolus vulgaris
Phvul.002G170100 2.0kb upstream 2.0kb upstream 3913 true Chr02: 33093248-33097160 Phaseolus vulgaris
Phvul.002G170100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 33095161-33097160 Phaseolus vulgaris
Phvul.002G170100 2.0kb downstream 2.0kb downstream 3913 true Chr02: 33091248-33095160 Phaseolus vulgaris
Phvul.002G170100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 33091248-33093247 Phaseolus vulgaris
Phvul.002G170100 5.0kb upstream 5.0kb upstream 6913 true Chr02: 33093248-33100160 Phaseolus vulgaris
Phvul.002G170100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 33095161-33100160 Phaseolus vulgaris
Phvul.002G170100 5.0kb downstream 5.0kb downstream 6913 true Chr02: 33088248-33095160 Phaseolus vulgaris
Phvul.002G170100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 33088248-33093247 Phaseolus vulgaris
Phvul.002G170100 10.0kb upstream 10.0kb upstream 11913 true Chr02: 33093248-33105160 Phaseolus vulgaris
Phvul.002G170100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 33095161-33105160 Phaseolus vulgaris
Phvul.002G170100 10.0kb downstream 10.0kb downstream 11913 true Chr02: 33083248-33095160 Phaseolus vulgaris
Phvul.002G170100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 33083248-33093247 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305225 5265 Fabidae View MSA
124065946 5270 Rosid View MSA
123738486 5271 Pentapetalae View MSA
122789950 5272 Eudicot View MSA
122042424 5273 Angiosperm View MSA
121344339 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.63982 0.0 7.72507    
cufflinks 7.09598 0.0 18.9549    
cufflinks 0.623812 0.0 2.15113    
cufflinks 3.85886 0.0 11.0065    
cufflinks 4.78776 0.0 13.2718    
cufflinks 5.89134 0.0 15.9633    
cufflinks 3.72266 0.0 10.4636    
cufflinks 1.90604 0.0 5.76673    
cufflinks 4.95072 0.0 13.6286    
cufflinks 0.0128537 0.0 0.0634464 Low Low
cufflinks 6.15386 0.0 16.6349    

0 Strain