Gene : Phvul.002G170300 P. vulgaris v2.1
Defline:  (1 of 37) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  1718
Name:  ? Phvul.002G170300 Secondary Identifier:  ? PAC:37174508
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G170300 0.5kb upstream 0.5kb upstream 2220 true Chr02: 33002857-33005076 Phaseolus vulgaris
Phvul.002G170300 0.5kb upstream 0.5kb upstream 500 false Chr02: 33004577-33005076 Phaseolus vulgaris
Phvul.002G170300 0.5kb downstream 0.5kb downstream 2220 true Chr02: 33002357-33004576 Phaseolus vulgaris
Phvul.002G170300 0.5kb downstream 0.5kb downstream 500 false Chr02: 33002357-33002856 Phaseolus vulgaris
Phvul.002G170300 1.0kb upstream 1.0kb upstream 2720 true Chr02: 33002857-33005576 Phaseolus vulgaris
Phvul.002G170300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 33004577-33005576 Phaseolus vulgaris
Phvul.002G170300 1.0kb downstream 1.0kb downstream 2720 true Chr02: 33001857-33004576 Phaseolus vulgaris
Phvul.002G170300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 33001857-33002856 Phaseolus vulgaris
Phvul.002G170300 2.0kb upstream 2.0kb upstream 3720 true Chr02: 33002857-33006576 Phaseolus vulgaris
Phvul.002G170300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 33004577-33006576 Phaseolus vulgaris
Phvul.002G170300 2.0kb downstream 2.0kb downstream 3720 true Chr02: 33000857-33004576 Phaseolus vulgaris
Phvul.002G170300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 33000857-33002856 Phaseolus vulgaris
Phvul.002G170300 5.0kb upstream 5.0kb upstream 6720 true Chr02: 33002857-33009576 Phaseolus vulgaris
Phvul.002G170300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 33004577-33009576 Phaseolus vulgaris
Phvul.002G170300 5.0kb downstream 5.0kb downstream 6720 true Chr02: 32997857-33004576 Phaseolus vulgaris
Phvul.002G170300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32997857-33002856 Phaseolus vulgaris
Phvul.002G170300 10.0kb upstream 10.0kb upstream 11720 true Chr02: 33002857-33014576 Phaseolus vulgaris
Phvul.002G170300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 33004577-33014576 Phaseolus vulgaris
Phvul.002G170300 10.0kb downstream 10.0kb downstream 11720 true Chr02: 32992857-33004576 Phaseolus vulgaris
Phvul.002G170300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32992857-33002856 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313944 5265 Fabidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.1615 0.0 111.775 High  
cufflinks 127.872 0.0 355.875 High High
cufflinks 14.636 0.0 39.2331    
cufflinks 38.5342 0.0 99.6233 High  
cufflinks 39.2457 0.0 101.473 High  
cufflinks 38.2917 0.0 99.0033 High  
cufflinks 33.6252 0.0 86.9206 High  
cufflinks 30.674 0.0 79.3532 High  
cufflinks 29.0851 0.0 75.3078    
cufflinks 5.07661 0.0 15.0467   Low
cufflinks 53.4861 0.0 139.219 High  

0 Strain