Gene : Phvul.002G154800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23257:SF434 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE FAMILY PROTEIN Genomic Order:  1552
Name:  ? Phvul.002G154800 Secondary Identifier:  ? PAC:37174519
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G154800 0.5kb upstream 0.5kb upstream 7340 true Chr02: 30915202-30922541 Phaseolus vulgaris
Phvul.002G154800 0.5kb upstream 0.5kb upstream 500 false Chr02: 30915202-30915701 Phaseolus vulgaris
Phvul.002G154800 0.5kb downstream 0.5kb downstream 7340 true Chr02: 30915702-30923041 Phaseolus vulgaris
Phvul.002G154800 0.5kb downstream 0.5kb downstream 500 false Chr02: 30922542-30923041 Phaseolus vulgaris
Phvul.002G154800 1.0kb upstream 1.0kb upstream 7840 true Chr02: 30914702-30922541 Phaseolus vulgaris
Phvul.002G154800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30914702-30915701 Phaseolus vulgaris
Phvul.002G154800 1.0kb downstream 1.0kb downstream 7840 true Chr02: 30915702-30923541 Phaseolus vulgaris
Phvul.002G154800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30922542-30923541 Phaseolus vulgaris
Phvul.002G154800 2.0kb upstream 2.0kb upstream 8840 true Chr02: 30913702-30922541 Phaseolus vulgaris
Phvul.002G154800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30913702-30915701 Phaseolus vulgaris
Phvul.002G154800 2.0kb downstream 2.0kb downstream 8840 true Chr02: 30915702-30924541 Phaseolus vulgaris
Phvul.002G154800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30922542-30924541 Phaseolus vulgaris
Phvul.002G154800 5.0kb upstream 5.0kb upstream 11840 true Chr02: 30910702-30922541 Phaseolus vulgaris
Phvul.002G154800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30910702-30915701 Phaseolus vulgaris
Phvul.002G154800 5.0kb downstream 5.0kb downstream 11840 true Chr02: 30915702-30927541 Phaseolus vulgaris
Phvul.002G154800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30922542-30927541 Phaseolus vulgaris
Phvul.002G154800 10.0kb upstream 10.0kb upstream 16840 true Chr02: 30905702-30922541 Phaseolus vulgaris
Phvul.002G154800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30905702-30915701 Phaseolus vulgaris
Phvul.002G154800 10.0kb downstream 10.0kb downstream 16840 true Chr02: 30915702-30932541 Phaseolus vulgaris
Phvul.002G154800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30922542-30932541 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304633 5265 Fabidae View MSA
124062352 5270 Rosid View MSA
123741165 5271 Pentapetalae View MSA
122787795 5272 Eudicot View MSA
122045217 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310418 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.501111 0.0 2.78871   Low
cufflinks 0.364623 0.0 2.11163 Low Low
cufflinks 3.59527 0.0 16.3076    
cufflinks 0.404592 0.0 2.45121 Low Low
cufflinks 0.728083 0.0 3.56434    
cufflinks 4.34973 0.0 17.2314   High
cufflinks 4.57022 0.0 19.5289   High
cufflinks 2.90659 0.0 13.8446    
cufflinks 4.50419 0.0 16.1523   High
cufflinks 1.35449 0.0 6.99034    
cufflinks 0.885399 0.0 7.02578    

0 Strain