Gene : Phvul.002G156900 P. vulgaris v2.1
Defline:  (1 of 6) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  1573
Name:  ? Phvul.002G156900 Secondary Identifier:  ? PAC:37174842
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G156900 0.5kb upstream 0.5kb upstream 6597 true Chr02: 31156338-31162934 Phaseolus vulgaris
Phvul.002G156900 0.5kb upstream 0.5kb upstream 500 false Chr02: 31156338-31156837 Phaseolus vulgaris
Phvul.002G156900 0.5kb downstream 0.5kb downstream 6597 true Chr02: 31156838-31163434 Phaseolus vulgaris
Phvul.002G156900 0.5kb downstream 0.5kb downstream 500 false Chr02: 31162935-31163434 Phaseolus vulgaris
Phvul.002G156900 1.0kb upstream 1.0kb upstream 7097 true Chr02: 31155838-31162934 Phaseolus vulgaris
Phvul.002G156900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31155838-31156837 Phaseolus vulgaris
Phvul.002G156900 1.0kb downstream 1.0kb downstream 7097 true Chr02: 31156838-31163934 Phaseolus vulgaris
Phvul.002G156900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31162935-31163934 Phaseolus vulgaris
Phvul.002G156900 2.0kb upstream 2.0kb upstream 8097 true Chr02: 31154838-31162934 Phaseolus vulgaris
Phvul.002G156900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31154838-31156837 Phaseolus vulgaris
Phvul.002G156900 2.0kb downstream 2.0kb downstream 8097 true Chr02: 31156838-31164934 Phaseolus vulgaris
Phvul.002G156900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31162935-31164934 Phaseolus vulgaris
Phvul.002G156900 5.0kb upstream 5.0kb upstream 11097 true Chr02: 31151838-31162934 Phaseolus vulgaris
Phvul.002G156900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31151838-31156837 Phaseolus vulgaris
Phvul.002G156900 5.0kb downstream 5.0kb downstream 11097 true Chr02: 31156838-31167934 Phaseolus vulgaris
Phvul.002G156900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31162935-31167934 Phaseolus vulgaris
Phvul.002G156900 10.0kb upstream 10.0kb upstream 16097 true Chr02: 31146838-31162934 Phaseolus vulgaris
Phvul.002G156900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31146838-31156837 Phaseolus vulgaris
Phvul.002G156900 10.0kb downstream 10.0kb downstream 16097 true Chr02: 31156838-31172934 Phaseolus vulgaris
Phvul.002G156900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31162935-31172934 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655826 5273 Angiosperm View MSA
122296469 5265 Fabidae View MSA
124035659 5270 Rosid View MSA
123609142 5271 Pentapetalae View MSA
122643792 5272 Eudicot View MSA
120927925 5274 Embryophyte View MSA
122968567 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.204932 0.0 1.32267 Low Low
cufflinks 0.288864 0.0 1.73946 Low  
cufflinks 0.381029 0.0 1.62898 Low  
cufflinks 0.368987 0.0 2.1121 Low  
cufflinks 4.58266 0.0 14.1378    
cufflinks 0.258356 0.0 1.13587 Low  
cufflinks 6.19139 0.0 20.6384   High
cufflinks 12.0287 0.0 38.2287   High
cufflinks 4.70534 0.0 14.2346    
cufflinks 0.168339 0.0 1.13307 Low Low
cufflinks 3.63786 0.0 13.5227    

0 Strain