Gene : Phvul.002G157700 P. vulgaris v2.1
Defline:  (1 of 2) PF04032 - RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2) Genomic Order:  1581
Name:  ? Phvul.002G157700 Secondary Identifier:  ? PAC:37176203
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G157700 0.5kb upstream 0.5kb upstream 4873 true Chr02: 31222939-31227811 Phaseolus vulgaris
Phvul.002G157700 0.5kb upstream 0.5kb upstream 500 false Chr02: 31222939-31223438 Phaseolus vulgaris
Phvul.002G157700 0.5kb downstream 0.5kb downstream 4873 true Chr02: 31223439-31228311 Phaseolus vulgaris
Phvul.002G157700 0.5kb downstream 0.5kb downstream 500 false Chr02: 31227812-31228311 Phaseolus vulgaris
Phvul.002G157700 1.0kb upstream 1.0kb upstream 5373 true Chr02: 31222439-31227811 Phaseolus vulgaris
Phvul.002G157700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31222439-31223438 Phaseolus vulgaris
Phvul.002G157700 1.0kb downstream 1.0kb downstream 5373 true Chr02: 31223439-31228811 Phaseolus vulgaris
Phvul.002G157700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31227812-31228811 Phaseolus vulgaris
Phvul.002G157700 2.0kb upstream 2.0kb upstream 6373 true Chr02: 31221439-31227811 Phaseolus vulgaris
Phvul.002G157700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31221439-31223438 Phaseolus vulgaris
Phvul.002G157700 2.0kb downstream 2.0kb downstream 6373 true Chr02: 31223439-31229811 Phaseolus vulgaris
Phvul.002G157700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31227812-31229811 Phaseolus vulgaris
Phvul.002G157700 5.0kb upstream 5.0kb upstream 9373 true Chr02: 31218439-31227811 Phaseolus vulgaris
Phvul.002G157700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31218439-31223438 Phaseolus vulgaris
Phvul.002G157700 5.0kb downstream 5.0kb downstream 9373 true Chr02: 31223439-31232811 Phaseolus vulgaris
Phvul.002G157700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31227812-31232811 Phaseolus vulgaris
Phvul.002G157700 10.0kb upstream 10.0kb upstream 14373 true Chr02: 31213439-31227811 Phaseolus vulgaris
Phvul.002G157700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31213439-31223438 Phaseolus vulgaris
Phvul.002G157700 10.0kb downstream 10.0kb downstream 14373 true Chr02: 31223439-31237811 Phaseolus vulgaris
Phvul.002G157700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31227812-31237811 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251144 5265 Fabidae Singleton cluster - no MSA
124068689 5270 Rosid View MSA
123752807 5271 Pentapetalae View MSA
122789291 5272 Eudicot View MSA
122046039 5273 Angiosperm View MSA
121350637 5274 Embryophyte View MSA
123381830 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.75489 0.0 24.682   High
cufflinks 3.56792 0.0 20.7541    
cufflinks 2.99032 0.0 16.2569    
cufflinks 2.49381 0.0 16.2214   Low
cufflinks 2.58065 0.0 15.4286   Low
cufflinks 2.9929 0.0 16.0211    
cufflinks 3.56146 0.0 20.9945    
cufflinks 5.0381 0.0 23.3254   High
cufflinks 3.07099 0.0 18.4613    
cufflinks 3.58637 0.0 18.1406    
cufflinks 3.3759 0.0 20.0238    

0 Strain