Gene : Phvul.002G156200 P. vulgaris v2.1
Defline:  (1 of 5) PTHR22950:SF269 - EXPRESSED PROTEIN Genomic Order:  1566
Name:  ? Phvul.002G156200 Secondary Identifier:  ? PAC:37175954
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G156200 0.5kb upstream 0.5kb upstream 6316 true Chr02: 31090547-31096862 Phaseolus vulgaris
Phvul.002G156200 0.5kb upstream 0.5kb upstream 500 false Chr02: 31096363-31096862 Phaseolus vulgaris
Phvul.002G156200 0.5kb downstream 0.5kb downstream 6316 true Chr02: 31090047-31096362 Phaseolus vulgaris
Phvul.002G156200 0.5kb downstream 0.5kb downstream 500 false Chr02: 31090047-31090546 Phaseolus vulgaris
Phvul.002G156200 1.0kb upstream 1.0kb upstream 6816 true Chr02: 31090547-31097362 Phaseolus vulgaris
Phvul.002G156200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31096363-31097362 Phaseolus vulgaris
Phvul.002G156200 1.0kb downstream 1.0kb downstream 6816 true Chr02: 31089547-31096362 Phaseolus vulgaris
Phvul.002G156200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31089547-31090546 Phaseolus vulgaris
Phvul.002G156200 2.0kb upstream 2.0kb upstream 7816 true Chr02: 31090547-31098362 Phaseolus vulgaris
Phvul.002G156200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31096363-31098362 Phaseolus vulgaris
Phvul.002G156200 2.0kb downstream 2.0kb downstream 7816 true Chr02: 31088547-31096362 Phaseolus vulgaris
Phvul.002G156200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31088547-31090546 Phaseolus vulgaris
Phvul.002G156200 5.0kb upstream 5.0kb upstream 10816 true Chr02: 31090547-31101362 Phaseolus vulgaris
Phvul.002G156200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31096363-31101362 Phaseolus vulgaris
Phvul.002G156200 5.0kb downstream 5.0kb downstream 10816 true Chr02: 31085547-31096362 Phaseolus vulgaris
Phvul.002G156200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31085547-31090546 Phaseolus vulgaris
Phvul.002G156200 10.0kb upstream 10.0kb upstream 15816 true Chr02: 31090547-31106362 Phaseolus vulgaris
Phvul.002G156200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31096363-31106362 Phaseolus vulgaris
Phvul.002G156200 10.0kb downstream 10.0kb downstream 15816 true Chr02: 31080547-31096362 Phaseolus vulgaris
Phvul.002G156200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31080547-31090546 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255068 5265 Fabidae View MSA
124067158 5270 Rosid View MSA
123753416 5271 Pentapetalae View MSA
122789059 5272 Eudicot View MSA
122047534 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00406576 0.0 0.0311882 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00236072 0.0 0.0235562 Low  
cufflinks 4.50003E-4 0.0 0.0099485 Low  
cufflinks 2.94782E-4 0.0 0.00763725 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.68758E-5 0.0 0.00364105 Low Low
cufflinks 0.00692981 0.0 0.0447255 Low High

0 Strain