Gene : Phvul.002G146700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11119:SF54 - NUCLEOBASE-ASCORBATE TRANSPORTER 11 Genomic Order:  1470
Name:  ? Phvul.002G146700 Secondary Identifier:  ? PAC:37174589
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G146700 0.5kb upstream 0.5kb upstream 5873 true Chr02: 29641685-29647557 Phaseolus vulgaris
Phvul.002G146700 0.5kb upstream 0.5kb upstream 500 false Chr02: 29647058-29647557 Phaseolus vulgaris
Phvul.002G146700 0.5kb downstream 0.5kb downstream 5873 true Chr02: 29641185-29647057 Phaseolus vulgaris
Phvul.002G146700 0.5kb downstream 0.5kb downstream 500 false Chr02: 29641185-29641684 Phaseolus vulgaris
Phvul.002G146700 1.0kb upstream 1.0kb upstream 6373 true Chr02: 29641685-29648057 Phaseolus vulgaris
Phvul.002G146700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 29647058-29648057 Phaseolus vulgaris
Phvul.002G146700 1.0kb downstream 1.0kb downstream 6373 true Chr02: 29640685-29647057 Phaseolus vulgaris
Phvul.002G146700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 29640685-29641684 Phaseolus vulgaris
Phvul.002G146700 2.0kb upstream 2.0kb upstream 7373 true Chr02: 29641685-29649057 Phaseolus vulgaris
Phvul.002G146700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 29647058-29649057 Phaseolus vulgaris
Phvul.002G146700 2.0kb downstream 2.0kb downstream 7373 true Chr02: 29639685-29647057 Phaseolus vulgaris
Phvul.002G146700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 29639685-29641684 Phaseolus vulgaris
Phvul.002G146700 5.0kb upstream 5.0kb upstream 10373 true Chr02: 29641685-29652057 Phaseolus vulgaris
Phvul.002G146700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 29647058-29652057 Phaseolus vulgaris
Phvul.002G146700 5.0kb downstream 5.0kb downstream 10373 true Chr02: 29636685-29647057 Phaseolus vulgaris
Phvul.002G146700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 29636685-29641684 Phaseolus vulgaris
Phvul.002G146700 10.0kb upstream 10.0kb upstream 15373 true Chr02: 29641685-29657057 Phaseolus vulgaris
Phvul.002G146700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 29647058-29657057 Phaseolus vulgaris
Phvul.002G146700 10.0kb downstream 10.0kb downstream 15373 true Chr02: 29631685-29647057 Phaseolus vulgaris
Phvul.002G146700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 29631685-29641684 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314393 5265 Fabidae View MSA
124074779 5270 Rosid View MSA
123742744 5271 Pentapetalae View MSA
122788188 5272 Eudicot View MSA
122046196 5273 Angiosperm View MSA
121347942 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.7014 0.0 5.08761   Low
cufflinks 10.8394 0.0 28.0585    
cufflinks 5.60843 0.0 14.9892    
cufflinks 4.65822 0.0 12.7332    
cufflinks 10.8035 0.0 27.9943    
cufflinks 8.60325 0.0 22.4008    
cufflinks 6.57103 0.0 17.2842    
cufflinks 8.58611 0.0 22.3128    
cufflinks 4.71858 0.0 12.7481    
cufflinks 19.1459 0.0 49.7777   High
cufflinks 12.2694 0.0 31.7226    

0 Strain