Gene : Phvul.002G147100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR18937//PTHR18937:SF222 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  1474
Name:  ? Phvul.002G147100 Secondary Identifier:  ? PAC:37175268
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G147100 0.5kb upstream 0.5kb upstream 2705 true Chr02: 29708070-29710774 Phaseolus vulgaris
Phvul.002G147100 0.5kb upstream 0.5kb upstream 500 false Chr02: 29708070-29708569 Phaseolus vulgaris
Phvul.002G147100 0.5kb downstream 0.5kb downstream 2705 true Chr02: 29708570-29711274 Phaseolus vulgaris
Phvul.002G147100 0.5kb downstream 0.5kb downstream 500 false Chr02: 29710775-29711274 Phaseolus vulgaris
Phvul.002G147100 1.0kb upstream 1.0kb upstream 3205 true Chr02: 29707570-29710774 Phaseolus vulgaris
Phvul.002G147100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 29707570-29708569 Phaseolus vulgaris
Phvul.002G147100 1.0kb downstream 1.0kb downstream 3205 true Chr02: 29708570-29711774 Phaseolus vulgaris
Phvul.002G147100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 29710775-29711774 Phaseolus vulgaris
Phvul.002G147100 2.0kb upstream 2.0kb upstream 4205 true Chr02: 29706570-29710774 Phaseolus vulgaris
Phvul.002G147100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 29706570-29708569 Phaseolus vulgaris
Phvul.002G147100 2.0kb downstream 2.0kb downstream 4205 true Chr02: 29708570-29712774 Phaseolus vulgaris
Phvul.002G147100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 29710775-29712774 Phaseolus vulgaris
Phvul.002G147100 5.0kb upstream 5.0kb upstream 7205 true Chr02: 29703570-29710774 Phaseolus vulgaris
Phvul.002G147100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 29703570-29708569 Phaseolus vulgaris
Phvul.002G147100 5.0kb downstream 5.0kb downstream 7205 true Chr02: 29708570-29715774 Phaseolus vulgaris
Phvul.002G147100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 29710775-29715774 Phaseolus vulgaris
Phvul.002G147100 10.0kb upstream 10.0kb upstream 12205 true Chr02: 29698570-29710774 Phaseolus vulgaris
Phvul.002G147100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 29698570-29708569 Phaseolus vulgaris
Phvul.002G147100 10.0kb downstream 10.0kb downstream 12205 true Chr02: 29708570-29720774 Phaseolus vulgaris
Phvul.002G147100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 29710775-29720774 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122297133 5265 Fabidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0428131 0.0 0.189249 Low  
cufflinks 0.0664256 0.0 0.281621 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0272299 0.0 0.127859 Low  
cufflinks 0.144297 0.0 0.573257 Low High
cufflinks 0.0619394 0.0 0.263704 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.101367 0.0 0.414191 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0152622 0.0 0.0757163 Low Low

0 Strain