Gene : Phvul.002G149400 P. vulgaris v2.1
Defline:  (1 of 37) PF03000 - NPH3 family (NPH3) Genomic Order:  1498
Name:  ? Phvul.002G149400 Secondary Identifier:  ? PAC:37176421
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G149400 0.5kb upstream 0.5kb upstream 4131 true Chr02: 30177269-30181399 Phaseolus vulgaris
Phvul.002G149400 0.5kb upstream 0.5kb upstream 500 false Chr02: 30177269-30177768 Phaseolus vulgaris
Phvul.002G149400 0.5kb downstream 0.5kb downstream 4131 true Chr02: 30177769-30181899 Phaseolus vulgaris
Phvul.002G149400 0.5kb downstream 0.5kb downstream 500 false Chr02: 30181400-30181899 Phaseolus vulgaris
Phvul.002G149400 1.0kb upstream 1.0kb upstream 4631 true Chr02: 30176769-30181399 Phaseolus vulgaris
Phvul.002G149400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30176769-30177768 Phaseolus vulgaris
Phvul.002G149400 1.0kb downstream 1.0kb downstream 4631 true Chr02: 30177769-30182399 Phaseolus vulgaris
Phvul.002G149400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30181400-30182399 Phaseolus vulgaris
Phvul.002G149400 2.0kb upstream 2.0kb upstream 5631 true Chr02: 30175769-30181399 Phaseolus vulgaris
Phvul.002G149400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30175769-30177768 Phaseolus vulgaris
Phvul.002G149400 2.0kb downstream 2.0kb downstream 5631 true Chr02: 30177769-30183399 Phaseolus vulgaris
Phvul.002G149400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30181400-30183399 Phaseolus vulgaris
Phvul.002G149400 5.0kb upstream 5.0kb upstream 8631 true Chr02: 30172769-30181399 Phaseolus vulgaris
Phvul.002G149400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30172769-30177768 Phaseolus vulgaris
Phvul.002G149400 5.0kb downstream 5.0kb downstream 8631 true Chr02: 30177769-30186399 Phaseolus vulgaris
Phvul.002G149400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30181400-30186399 Phaseolus vulgaris
Phvul.002G149400 10.0kb upstream 10.0kb upstream 13631 true Chr02: 30167769-30181399 Phaseolus vulgaris
Phvul.002G149400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30167769-30177768 Phaseolus vulgaris
Phvul.002G149400 10.0kb downstream 10.0kb downstream 13631 true Chr02: 30177769-30191399 Phaseolus vulgaris
Phvul.002G149400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30181400-30191399 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302184 5265 Fabidae View MSA
124063063 5270 Rosid View MSA
123741197 5271 Pentapetalae View MSA
122790545 5272 Eudicot View MSA
122042377 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3863 0.0 37.2232    
cufflinks 4.77459 0.0 13.191   Low
cufflinks 16.5157 0.0 42.6907   High
cufflinks 13.3367 0.0 34.6072    
cufflinks 9.01478 0.0 23.8197    
cufflinks 12.6191 0.0 32.7213    
cufflinks 5.45487 0.0 14.9013    
cufflinks 3.51293 0.0 9.94859   Low
cufflinks 4.28023 0.0 11.9605   Low
cufflinks 8.01226 0.0 21.2507    
cufflinks 12.5329 0.0 32.5633    

0 Strain