Gene : Phvul.002G150000 P. vulgaris v2.1
Defline:  (1 of 53) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) Genomic Order:  1504
Name:  ? Phvul.002G150000 Secondary Identifier:  ? PAC:37177327
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G150000 0.5kb upstream 0.5kb upstream 12052 true Chr02: 30312561-30324612 Phaseolus vulgaris
Phvul.002G150000 0.5kb upstream 0.5kb upstream 500 false Chr02: 30324113-30324612 Phaseolus vulgaris
Phvul.002G150000 0.5kb downstream 0.5kb downstream 12052 true Chr02: 30312061-30324112 Phaseolus vulgaris
Phvul.002G150000 0.5kb downstream 0.5kb downstream 500 false Chr02: 30312061-30312560 Phaseolus vulgaris
Phvul.002G150000 1.0kb upstream 1.0kb upstream 12552 true Chr02: 30312561-30325112 Phaseolus vulgaris
Phvul.002G150000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30324113-30325112 Phaseolus vulgaris
Phvul.002G150000 1.0kb downstream 1.0kb downstream 12552 true Chr02: 30311561-30324112 Phaseolus vulgaris
Phvul.002G150000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30311561-30312560 Phaseolus vulgaris
Phvul.002G150000 2.0kb upstream 2.0kb upstream 13552 true Chr02: 30312561-30326112 Phaseolus vulgaris
Phvul.002G150000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30324113-30326112 Phaseolus vulgaris
Phvul.002G150000 2.0kb downstream 2.0kb downstream 13552 true Chr02: 30310561-30324112 Phaseolus vulgaris
Phvul.002G150000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30310561-30312560 Phaseolus vulgaris
Phvul.002G150000 5.0kb upstream 5.0kb upstream 16552 true Chr02: 30312561-30329112 Phaseolus vulgaris
Phvul.002G150000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30324113-30329112 Phaseolus vulgaris
Phvul.002G150000 5.0kb downstream 5.0kb downstream 16552 true Chr02: 30307561-30324112 Phaseolus vulgaris
Phvul.002G150000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30307561-30312560 Phaseolus vulgaris
Phvul.002G150000 10.0kb upstream 10.0kb upstream 21552 true Chr02: 30312561-30334112 Phaseolus vulgaris
Phvul.002G150000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30324113-30334112 Phaseolus vulgaris
Phvul.002G150000 10.0kb downstream 10.0kb downstream 21552 true Chr02: 30302561-30324112 Phaseolus vulgaris
Phvul.002G150000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30302561-30312560 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299431 5265 Fabidae View MSA
124063192 5270 Rosid View MSA
123743062 5271 Pentapetalae View MSA
122793644 5272 Eudicot View MSA
122046260 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346944 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.96171 0.0 36.9008    
cufflinks 3.50801 0.0 11.9627    
cufflinks 23.6066 0.0 89.7576   High
cufflinks 2.1804 0.0 10.0189    
cufflinks 2.75096 0.0 10.1009    
cufflinks 10.1031 0.0 39.3955   High
cufflinks 2.56255 0.0 13.7112    
cufflinks 4.04066 0.0 20.9855    
cufflinks 2.18319 0.0 11.1449    
cufflinks 6.46804 0.0 27.2136    
cufflinks 2.48746 0.0 13.7004    

0 Strain