Gene : Phvul.002G148100 P. vulgaris v2.1
Defline:  (1 of 3) KOG1870 - Ubiquitin C-terminal hydrolase Genomic Order:  1484
Name:  ? Phvul.002G148100 Secondary Identifier:  ? PAC:37177567
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G148100 0.5kb upstream 0.5kb upstream 9042 true Chr02: 29888604-29897645 Phaseolus vulgaris
Phvul.002G148100 0.5kb upstream 0.5kb upstream 500 false Chr02: 29897146-29897645 Phaseolus vulgaris
Phvul.002G148100 0.5kb downstream 0.5kb downstream 9042 true Chr02: 29888104-29897145 Phaseolus vulgaris
Phvul.002G148100 0.5kb downstream 0.5kb downstream 500 false Chr02: 29888104-29888603 Phaseolus vulgaris
Phvul.002G148100 1.0kb upstream 1.0kb upstream 9542 true Chr02: 29888604-29898145 Phaseolus vulgaris
Phvul.002G148100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 29897146-29898145 Phaseolus vulgaris
Phvul.002G148100 1.0kb downstream 1.0kb downstream 9542 true Chr02: 29887604-29897145 Phaseolus vulgaris
Phvul.002G148100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 29887604-29888603 Phaseolus vulgaris
Phvul.002G148100 2.0kb upstream 2.0kb upstream 10542 true Chr02: 29888604-29899145 Phaseolus vulgaris
Phvul.002G148100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 29897146-29899145 Phaseolus vulgaris
Phvul.002G148100 2.0kb downstream 2.0kb downstream 10542 true Chr02: 29886604-29897145 Phaseolus vulgaris
Phvul.002G148100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 29886604-29888603 Phaseolus vulgaris
Phvul.002G148100 5.0kb upstream 5.0kb upstream 13542 true Chr02: 29888604-29902145 Phaseolus vulgaris
Phvul.002G148100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 29897146-29902145 Phaseolus vulgaris
Phvul.002G148100 5.0kb downstream 5.0kb downstream 13542 true Chr02: 29883604-29897145 Phaseolus vulgaris
Phvul.002G148100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 29883604-29888603 Phaseolus vulgaris
Phvul.002G148100 10.0kb upstream 10.0kb upstream 18542 true Chr02: 29888604-29907145 Phaseolus vulgaris
Phvul.002G148100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 29897146-29907145 Phaseolus vulgaris
Phvul.002G148100 10.0kb downstream 10.0kb downstream 18542 true Chr02: 29878604-29897145 Phaseolus vulgaris
Phvul.002G148100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 29878604-29888603 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309003 5265 Fabidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.34029 0.0 15.4583   Low
cufflinks 7.69322 0.0 22.003    
cufflinks 11.2819 0.0 36.1915    
cufflinks 4.03151 0.0 12.6787   Low
cufflinks 8.61552 0.0 27.9158    
cufflinks 9.98398 0.0 31.9962    
cufflinks 9.20719 0.0 29.8188    
cufflinks 7.27001 0.0 23.8889    
cufflinks 10.4509 0.0 33.5647    
cufflinks 13.2823 0.0 42.399   High
cufflinks 7.71562 0.0 25.275    

0 Strain