Gene : Phvul.002G148800 P. vulgaris v2.1
Genomic Order:  1492 Name:  ? Phvul.002G148800
Secondary Identifier:  ? PAC:37176243
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G148800 0.5kb upstream 0.5kb upstream 1655 true Chr02: 30037400-30039054 Phaseolus vulgaris
Phvul.002G148800 0.5kb upstream 0.5kb upstream 500 false Chr02: 30037400-30037899 Phaseolus vulgaris
Phvul.002G148800 0.5kb downstream 0.5kb downstream 1655 true Chr02: 30037900-30039554 Phaseolus vulgaris
Phvul.002G148800 0.5kb downstream 0.5kb downstream 500 false Chr02: 30039055-30039554 Phaseolus vulgaris
Phvul.002G148800 1.0kb upstream 1.0kb upstream 2155 true Chr02: 30036900-30039054 Phaseolus vulgaris
Phvul.002G148800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30036900-30037899 Phaseolus vulgaris
Phvul.002G148800 1.0kb downstream 1.0kb downstream 2155 true Chr02: 30037900-30040054 Phaseolus vulgaris
Phvul.002G148800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30039055-30040054 Phaseolus vulgaris
Phvul.002G148800 2.0kb upstream 2.0kb upstream 3155 true Chr02: 30035900-30039054 Phaseolus vulgaris
Phvul.002G148800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30035900-30037899 Phaseolus vulgaris
Phvul.002G148800 2.0kb downstream 2.0kb downstream 3155 true Chr02: 30037900-30041054 Phaseolus vulgaris
Phvul.002G148800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30039055-30041054 Phaseolus vulgaris
Phvul.002G148800 5.0kb upstream 5.0kb upstream 6155 true Chr02: 30032900-30039054 Phaseolus vulgaris
Phvul.002G148800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30032900-30037899 Phaseolus vulgaris
Phvul.002G148800 5.0kb downstream 5.0kb downstream 6155 true Chr02: 30037900-30044054 Phaseolus vulgaris
Phvul.002G148800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30039055-30044054 Phaseolus vulgaris
Phvul.002G148800 10.0kb upstream 10.0kb upstream 11155 true Chr02: 30027900-30039054 Phaseolus vulgaris
Phvul.002G148800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30027900-30037899 Phaseolus vulgaris
Phvul.002G148800 10.0kb downstream 10.0kb downstream 11155 true Chr02: 30037900-30049054 Phaseolus vulgaris
Phvul.002G148800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30039055-30049054 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312491 5265 Fabidae View MSA
124069623 5270 Rosid View MSA
123742553 5271 Pentapetalae View MSA
122795340 5272 Eudicot View MSA
122049491 5273 Angiosperm View MSA
121311433 5274 Embryophyte View MSA
123348729 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176075 0.0 0.741905 Low  
cufflinks 0.932738 0.0 3.43893    
cufflinks 5.61847 0.0 17.0161   High
cufflinks 0.214813 0.0 0.897815 Low  
cufflinks 0.790001 0.0 2.98108    
cufflinks 3.55263 0.0 11.3563   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0417472 0.0 0.202773 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.850546 0.0 3.17243    

0 Strain