Gene : Phvul.002G150900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  1513
Name:  ? Phvul.002G150900 Secondary Identifier:  ? PAC:37176578
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-662 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G150900 0.5kb upstream 0.5kb upstream 4355 true Chr02: 30407744-30412098 Phaseolus vulgaris
Phvul.002G150900 0.5kb upstream 0.5kb upstream 500 false Chr02: 30407744-30408243 Phaseolus vulgaris
Phvul.002G150900 0.5kb downstream 0.5kb downstream 4355 true Chr02: 30408244-30412598 Phaseolus vulgaris
Phvul.002G150900 0.5kb downstream 0.5kb downstream 500 false Chr02: 30412099-30412598 Phaseolus vulgaris
Phvul.002G150900 1.0kb upstream 1.0kb upstream 4855 true Chr02: 30407244-30412098 Phaseolus vulgaris
Phvul.002G150900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30407244-30408243 Phaseolus vulgaris
Phvul.002G150900 1.0kb downstream 1.0kb downstream 4855 true Chr02: 30408244-30413098 Phaseolus vulgaris
Phvul.002G150900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30412099-30413098 Phaseolus vulgaris
Phvul.002G150900 2.0kb upstream 2.0kb upstream 5855 true Chr02: 30406244-30412098 Phaseolus vulgaris
Phvul.002G150900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30406244-30408243 Phaseolus vulgaris
Phvul.002G150900 2.0kb downstream 2.0kb downstream 5855 true Chr02: 30408244-30414098 Phaseolus vulgaris
Phvul.002G150900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30412099-30414098 Phaseolus vulgaris
Phvul.002G150900 5.0kb upstream 5.0kb upstream 8855 true Chr02: 30403244-30412098 Phaseolus vulgaris
Phvul.002G150900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30403244-30408243 Phaseolus vulgaris
Phvul.002G150900 5.0kb downstream 5.0kb downstream 8855 true Chr02: 30408244-30417098 Phaseolus vulgaris
Phvul.002G150900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30412099-30417098 Phaseolus vulgaris
Phvul.002G150900 10.0kb upstream 10.0kb upstream 13855 true Chr02: 30398244-30412098 Phaseolus vulgaris
Phvul.002G150900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30398244-30408243 Phaseolus vulgaris
Phvul.002G150900 10.0kb downstream 10.0kb downstream 13855 true Chr02: 30408244-30422098 Phaseolus vulgaris
Phvul.002G150900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30412099-30422098 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304416 5265 Fabidae View MSA
124068369 5270 Rosid View MSA
123738172 5271 Pentapetalae View MSA
122787555 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.66487 0.0 23.62    
cufflinks 30.0849 0.0 77.8152   High
cufflinks 12.7983 0.0 33.891    
cufflinks 32.1083 0.0 83.1308   High
cufflinks 10.0996 0.0 27.3068    
cufflinks 17.5236 0.0 45.632    
cufflinks 7.08982 0.0 19.6439   Low
cufflinks 8.20129 0.0 22.4579    
cufflinks 7.31885 0.0 20.2723   Low
cufflinks 16.3697 0.0 42.779    
cufflinks 14.7435 0.0 38.7682    

0 Strain