Gene : Phvul.002G151200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  1516
Name:  ? Phvul.002G151200 Secondary Identifier:  ? PAC:37174640
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G151200 0.5kb upstream 0.5kb upstream 2497 true Chr02: 30449451-30451947 Phaseolus vulgaris
Phvul.002G151200 0.5kb upstream 0.5kb upstream 500 false Chr02: 30449451-30449950 Phaseolus vulgaris
Phvul.002G151200 0.5kb downstream 0.5kb downstream 2497 true Chr02: 30449951-30452447 Phaseolus vulgaris
Phvul.002G151200 0.5kb downstream 0.5kb downstream 500 false Chr02: 30451948-30452447 Phaseolus vulgaris
Phvul.002G151200 1.0kb upstream 1.0kb upstream 2997 true Chr02: 30448951-30451947 Phaseolus vulgaris
Phvul.002G151200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30448951-30449950 Phaseolus vulgaris
Phvul.002G151200 1.0kb downstream 1.0kb downstream 2997 true Chr02: 30449951-30452947 Phaseolus vulgaris
Phvul.002G151200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30451948-30452947 Phaseolus vulgaris
Phvul.002G151200 2.0kb upstream 2.0kb upstream 3997 true Chr02: 30447951-30451947 Phaseolus vulgaris
Phvul.002G151200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30447951-30449950 Phaseolus vulgaris
Phvul.002G151200 2.0kb downstream 2.0kb downstream 3997 true Chr02: 30449951-30453947 Phaseolus vulgaris
Phvul.002G151200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30451948-30453947 Phaseolus vulgaris
Phvul.002G151200 5.0kb upstream 5.0kb upstream 6997 true Chr02: 30444951-30451947 Phaseolus vulgaris
Phvul.002G151200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30444951-30449950 Phaseolus vulgaris
Phvul.002G151200 5.0kb downstream 5.0kb downstream 6997 true Chr02: 30449951-30456947 Phaseolus vulgaris
Phvul.002G151200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30451948-30456947 Phaseolus vulgaris
Phvul.002G151200 10.0kb upstream 10.0kb upstream 11997 true Chr02: 30439951-30451947 Phaseolus vulgaris
Phvul.002G151200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30439951-30449950 Phaseolus vulgaris
Phvul.002G151200 10.0kb downstream 10.0kb downstream 11997 true Chr02: 30449951-30461947 Phaseolus vulgaris
Phvul.002G151200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30451948-30461947 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658234 5273 Angiosperm View MSA
122255353 5265 Fabidae View MSA
124041586 5270 Rosid View MSA
123612347 5271 Pentapetalae View MSA
122646853 5272 Eudicot View MSA
120930231 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.5381 0.0 90.0613 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 25.6996 0.0 70.4802    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain