Gene : Phvul.002G150600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11102 - SEL-1-LIKE PROTEIN Genomic Order:  1510
Name:  ? Phvul.002G150600 Secondary Identifier:  ? PAC:37175463
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G150600 0.5kb upstream 0.5kb upstream 3691 true Chr02: 30377127-30380817 Phaseolus vulgaris
Phvul.002G150600 0.5kb upstream 0.5kb upstream 500 false Chr02: 30380318-30380817 Phaseolus vulgaris
Phvul.002G150600 0.5kb downstream 0.5kb downstream 3691 true Chr02: 30376627-30380317 Phaseolus vulgaris
Phvul.002G150600 0.5kb downstream 0.5kb downstream 500 false Chr02: 30376627-30377126 Phaseolus vulgaris
Phvul.002G150600 1.0kb upstream 1.0kb upstream 4191 true Chr02: 30377127-30381317 Phaseolus vulgaris
Phvul.002G150600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30380318-30381317 Phaseolus vulgaris
Phvul.002G150600 1.0kb downstream 1.0kb downstream 4191 true Chr02: 30376127-30380317 Phaseolus vulgaris
Phvul.002G150600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30376127-30377126 Phaseolus vulgaris
Phvul.002G150600 2.0kb upstream 2.0kb upstream 5191 true Chr02: 30377127-30382317 Phaseolus vulgaris
Phvul.002G150600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30380318-30382317 Phaseolus vulgaris
Phvul.002G150600 2.0kb downstream 2.0kb downstream 5191 true Chr02: 30375127-30380317 Phaseolus vulgaris
Phvul.002G150600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30375127-30377126 Phaseolus vulgaris
Phvul.002G150600 5.0kb upstream 5.0kb upstream 8191 true Chr02: 30377127-30385317 Phaseolus vulgaris
Phvul.002G150600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30380318-30385317 Phaseolus vulgaris
Phvul.002G150600 5.0kb downstream 5.0kb downstream 8191 true Chr02: 30372127-30380317 Phaseolus vulgaris
Phvul.002G150600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30372127-30377126 Phaseolus vulgaris
Phvul.002G150600 10.0kb upstream 10.0kb upstream 13191 true Chr02: 30377127-30390317 Phaseolus vulgaris
Phvul.002G150600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30380318-30390317 Phaseolus vulgaris
Phvul.002G150600 10.0kb downstream 10.0kb downstream 13191 true Chr02: 30367127-30380317 Phaseolus vulgaris
Phvul.002G150600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30367127-30377126 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308508 5265 Fabidae View MSA
124063984 5270 Rosid View MSA
123747474 5271 Pentapetalae View MSA
122790025 5272 Eudicot View MSA
122044811 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121345855 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0276 0.0 64.1864    
cufflinks 15.3097 0.0 57.4969    
cufflinks 22.7527 0.0 80.3867   High
cufflinks 13.6004 0.0 50.9244    
cufflinks 14.9556 0.0 54.4299    
cufflinks 16.346 0.0 59.8834    
cufflinks 17.0418 0.0 60.675    
cufflinks 12.1031 0.0 45.749   Low
cufflinks 11.0547 0.0 42.5004   Low
cufflinks 22.6021 0.0 79.7507   High
cufflinks 21.0127 0.0 75.7605    

0 Strain