Gene : Phvul.002G137500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32263:SF4 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Genomic Order:  1377
Name:  ? Phvul.002G137500 Secondary Identifier:  ? PAC:37175043
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G137500 0.5kb upstream 0.5kb upstream 7224 true Chr02: 28352063-28359286 Phaseolus vulgaris
Phvul.002G137500 0.5kb upstream 0.5kb upstream 500 false Chr02: 28358787-28359286 Phaseolus vulgaris
Phvul.002G137500 0.5kb downstream 0.5kb downstream 7224 true Chr02: 28351563-28358786 Phaseolus vulgaris
Phvul.002G137500 0.5kb downstream 0.5kb downstream 500 false Chr02: 28351563-28352062 Phaseolus vulgaris
Phvul.002G137500 1.0kb upstream 1.0kb upstream 7724 true Chr02: 28352063-28359786 Phaseolus vulgaris
Phvul.002G137500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28358787-28359786 Phaseolus vulgaris
Phvul.002G137500 1.0kb downstream 1.0kb downstream 7724 true Chr02: 28351063-28358786 Phaseolus vulgaris
Phvul.002G137500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28351063-28352062 Phaseolus vulgaris
Phvul.002G137500 2.0kb upstream 2.0kb upstream 8724 true Chr02: 28352063-28360786 Phaseolus vulgaris
Phvul.002G137500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28358787-28360786 Phaseolus vulgaris
Phvul.002G137500 2.0kb downstream 2.0kb downstream 8724 true Chr02: 28350063-28358786 Phaseolus vulgaris
Phvul.002G137500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28350063-28352062 Phaseolus vulgaris
Phvul.002G137500 5.0kb upstream 5.0kb upstream 11724 true Chr02: 28352063-28363786 Phaseolus vulgaris
Phvul.002G137500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28358787-28363786 Phaseolus vulgaris
Phvul.002G137500 5.0kb downstream 5.0kb downstream 11724 true Chr02: 28347063-28358786 Phaseolus vulgaris
Phvul.002G137500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28347063-28352062 Phaseolus vulgaris
Phvul.002G137500 10.0kb upstream 10.0kb upstream 16724 true Chr02: 28352063-28368786 Phaseolus vulgaris
Phvul.002G137500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28358787-28368786 Phaseolus vulgaris
Phvul.002G137500 10.0kb downstream 10.0kb downstream 16724 true Chr02: 28342063-28358786 Phaseolus vulgaris
Phvul.002G137500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28342063-28352062 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315260 5265 Fabidae View MSA
124062640 5270 Rosid View MSA
123747359 5271 Pentapetalae View MSA
122788093 5272 Eudicot View MSA
122047704 5273 Angiosperm View MSA
121349325 5274 Embryophyte View MSA
123381278 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.9741 0.0 122.288 High  
cufflinks 45.048 0.0 137.892 High  
cufflinks 57.6568 0.0 186.847 High  
cufflinks 24.906 0.0 79.787   Low
cufflinks 39.0697 0.0 132.698 High  
cufflinks 52.2457 0.0 190.141 High  
cufflinks 60.8656 0.0 229.57 High  
cufflinks 54.4388 0.0 203.118 High  
cufflinks 58.2754 0.0 186.063 High  
cufflinks 79.0244 0.0 275.555 High High
cufflinks 39.9663 0.0 136.636 High  

0 Strain