Gene : Phvul.002G137800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  1380
Name:  ? Phvul.002G137800 Secondary Identifier:  ? PAC:37175400
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G137800 0.5kb upstream 0.5kb upstream 5077 true Chr02: 28373764-28378840 Phaseolus vulgaris
Phvul.002G137800 0.5kb upstream 0.5kb upstream 500 false Chr02: 28373764-28374263 Phaseolus vulgaris
Phvul.002G137800 0.5kb downstream 0.5kb downstream 5077 true Chr02: 28374264-28379340 Phaseolus vulgaris
Phvul.002G137800 0.5kb downstream 0.5kb downstream 500 false Chr02: 28378841-28379340 Phaseolus vulgaris
Phvul.002G137800 1.0kb upstream 1.0kb upstream 5577 true Chr02: 28373264-28378840 Phaseolus vulgaris
Phvul.002G137800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28373264-28374263 Phaseolus vulgaris
Phvul.002G137800 1.0kb downstream 1.0kb downstream 5577 true Chr02: 28374264-28379840 Phaseolus vulgaris
Phvul.002G137800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28378841-28379840 Phaseolus vulgaris
Phvul.002G137800 2.0kb upstream 2.0kb upstream 6577 true Chr02: 28372264-28378840 Phaseolus vulgaris
Phvul.002G137800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28372264-28374263 Phaseolus vulgaris
Phvul.002G137800 2.0kb downstream 2.0kb downstream 6577 true Chr02: 28374264-28380840 Phaseolus vulgaris
Phvul.002G137800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28378841-28380840 Phaseolus vulgaris
Phvul.002G137800 5.0kb upstream 5.0kb upstream 9577 true Chr02: 28369264-28378840 Phaseolus vulgaris
Phvul.002G137800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28369264-28374263 Phaseolus vulgaris
Phvul.002G137800 5.0kb downstream 5.0kb downstream 9577 true Chr02: 28374264-28383840 Phaseolus vulgaris
Phvul.002G137800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28378841-28383840 Phaseolus vulgaris
Phvul.002G137800 10.0kb upstream 10.0kb upstream 14577 true Chr02: 28364264-28378840 Phaseolus vulgaris
Phvul.002G137800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28364264-28374263 Phaseolus vulgaris
Phvul.002G137800 10.0kb downstream 10.0kb downstream 14577 true Chr02: 28374264-28388840 Phaseolus vulgaris
Phvul.002G137800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28378841-28388840 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306951 5265 Fabidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 705.323 0.0 5153.69 High High
cufflinks 43.6753 0.0 140.77 High  
cufflinks 131.524 0.0 515.453 High  
cufflinks 66.7839 0.0 229.241 High  
cufflinks 31.6455 0.0 101.777    
cufflinks 51.2982 0.0 168.329 High  
cufflinks 11.4795 0.0 40.2433   Low
cufflinks 12.2756 0.0 43.5853   Low
cufflinks 14.5672 0.0 48.4588    
cufflinks 41.2651 0.0 131.92 High  
cufflinks 30.675 0.0 97.6811    

0 Strain