Gene : Phvul.002G136600 P. vulgaris v2.1
Defline:  (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1) Genomic Order:  1368
Name:  ? Phvul.002G136600 Secondary Identifier:  ? PAC:37175008
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1319 Phaseolus vulgaris pathologic  
Pvulgaris PWY4FS-7 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7411 Phaseolus vulgaris pathologic  
Pvulgaris TRIGLSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G136600 0.5kb upstream 0.5kb upstream 10052 true Chr02: 28182584-28192635 Phaseolus vulgaris
Phvul.002G136600 0.5kb upstream 0.5kb upstream 500 false Chr02: 28192136-28192635 Phaseolus vulgaris
Phvul.002G136600 0.5kb downstream 0.5kb downstream 10052 true Chr02: 28182084-28192135 Phaseolus vulgaris
Phvul.002G136600 0.5kb downstream 0.5kb downstream 500 false Chr02: 28182084-28182583 Phaseolus vulgaris
Phvul.002G136600 1.0kb upstream 1.0kb upstream 10552 true Chr02: 28182584-28193135 Phaseolus vulgaris
Phvul.002G136600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28192136-28193135 Phaseolus vulgaris
Phvul.002G136600 1.0kb downstream 1.0kb downstream 10552 true Chr02: 28181584-28192135 Phaseolus vulgaris
Phvul.002G136600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28181584-28182583 Phaseolus vulgaris
Phvul.002G136600 2.0kb upstream 2.0kb upstream 11552 true Chr02: 28182584-28194135 Phaseolus vulgaris
Phvul.002G136600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28192136-28194135 Phaseolus vulgaris
Phvul.002G136600 2.0kb downstream 2.0kb downstream 11552 true Chr02: 28180584-28192135 Phaseolus vulgaris
Phvul.002G136600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28180584-28182583 Phaseolus vulgaris
Phvul.002G136600 5.0kb upstream 5.0kb upstream 14552 true Chr02: 28182584-28197135 Phaseolus vulgaris
Phvul.002G136600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28192136-28197135 Phaseolus vulgaris
Phvul.002G136600 5.0kb downstream 5.0kb downstream 14552 true Chr02: 28177584-28192135 Phaseolus vulgaris
Phvul.002G136600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28177584-28182583 Phaseolus vulgaris
Phvul.002G136600 10.0kb upstream 10.0kb upstream 19552 true Chr02: 28182584-28202135 Phaseolus vulgaris
Phvul.002G136600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28192136-28202135 Phaseolus vulgaris
Phvul.002G136600 10.0kb downstream 10.0kb downstream 19552 true Chr02: 28172584-28192135 Phaseolus vulgaris
Phvul.002G136600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28172584-28182583 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306286 5265 Fabidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.0017 0.0 143.025 High High
cufflinks 13.7075 0.0 36.2022    
cufflinks 50.2762 0.0 132.628 High High
cufflinks 16.0493 0.0 42.0152    
cufflinks 17.7092 0.0 46.1885    
cufflinks 25.0807 0.0 64.8434    
cufflinks 7.15626 0.0 19.918   Low
cufflinks 6.01946 0.0 16.9571   Low
cufflinks 7.52753 0.0 20.9036   Low
cufflinks 13.4337 0.0 35.4989    
cufflinks 12.2059 0.0 32.5878    

0 Strain