Gene : Phvul.002G137100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10694:SF33 - TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN Genomic Order:  1373
Name:  ? Phvul.002G137100 Secondary Identifier:  ? PAC:37177660
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G137100 0.5kb upstream 0.5kb upstream 7044 true Chr02: 28257904-28264947 Phaseolus vulgaris
Phvul.002G137100 0.5kb upstream 0.5kb upstream 500 false Chr02: 28257904-28258403 Phaseolus vulgaris
Phvul.002G137100 0.5kb downstream 0.5kb downstream 7044 true Chr02: 28258404-28265447 Phaseolus vulgaris
Phvul.002G137100 0.5kb downstream 0.5kb downstream 500 false Chr02: 28264948-28265447 Phaseolus vulgaris
Phvul.002G137100 1.0kb upstream 1.0kb upstream 7544 true Chr02: 28257404-28264947 Phaseolus vulgaris
Phvul.002G137100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28257404-28258403 Phaseolus vulgaris
Phvul.002G137100 1.0kb downstream 1.0kb downstream 7544 true Chr02: 28258404-28265947 Phaseolus vulgaris
Phvul.002G137100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28264948-28265947 Phaseolus vulgaris
Phvul.002G137100 2.0kb upstream 2.0kb upstream 8544 true Chr02: 28256404-28264947 Phaseolus vulgaris
Phvul.002G137100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28256404-28258403 Phaseolus vulgaris
Phvul.002G137100 2.0kb downstream 2.0kb downstream 8544 true Chr02: 28258404-28266947 Phaseolus vulgaris
Phvul.002G137100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28264948-28266947 Phaseolus vulgaris
Phvul.002G137100 5.0kb upstream 5.0kb upstream 11544 true Chr02: 28253404-28264947 Phaseolus vulgaris
Phvul.002G137100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28253404-28258403 Phaseolus vulgaris
Phvul.002G137100 5.0kb downstream 5.0kb downstream 11544 true Chr02: 28258404-28269947 Phaseolus vulgaris
Phvul.002G137100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28264948-28269947 Phaseolus vulgaris
Phvul.002G137100 10.0kb upstream 10.0kb upstream 16544 true Chr02: 28248404-28264947 Phaseolus vulgaris
Phvul.002G137100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28248404-28258403 Phaseolus vulgaris
Phvul.002G137100 10.0kb downstream 10.0kb downstream 16544 true Chr02: 28258404-28274947 Phaseolus vulgaris
Phvul.002G137100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28264948-28274947 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303310 5265 Fabidae View MSA
124063293 5270 Rosid View MSA
123753636 5271 Pentapetalae View MSA
122788405 5272 Eudicot View MSA
122042889 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121310039 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.6217 0.0 4.85237    
cufflinks 2.09262 0.0 6.1062    
cufflinks 10.1379 0.0 26.2552    
cufflinks 2.84593 0.0 8.09648    
cufflinks 3.94878 0.0 10.8968    
cufflinks 9.98614 0.0 25.8762    
cufflinks 6.85171 0.0 18.0272    
cufflinks 6.64444 0.0 17.4717    
cufflinks 11.1035 0.0 28.7388    
cufflinks 0.130296 0.0 0.505379 Low Low
cufflinks 3.38384 0.0 9.45919    

0 Strain