Gene : Phvul.002G139800 P. vulgaris v2.1
Defline:  (1 of 4) KOG3140 - Predicted membrane protein Genomic Order:  1396
Name:  ? Phvul.002G139800 Secondary Identifier:  ? PAC:37176155
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G139800 0.5kb upstream 0.5kb upstream 3767 true Chr02: 28566970-28570736 Phaseolus vulgaris
Phvul.002G139800 0.5kb upstream 0.5kb upstream 500 false Chr02: 28566970-28567469 Phaseolus vulgaris
Phvul.002G139800 0.5kb downstream 0.5kb downstream 3767 true Chr02: 28567470-28571236 Phaseolus vulgaris
Phvul.002G139800 0.5kb downstream 0.5kb downstream 500 false Chr02: 28570737-28571236 Phaseolus vulgaris
Phvul.002G139800 1.0kb upstream 1.0kb upstream 4267 true Chr02: 28566470-28570736 Phaseolus vulgaris
Phvul.002G139800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28566470-28567469 Phaseolus vulgaris
Phvul.002G139800 1.0kb downstream 1.0kb downstream 4267 true Chr02: 28567470-28571736 Phaseolus vulgaris
Phvul.002G139800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28570737-28571736 Phaseolus vulgaris
Phvul.002G139800 2.0kb upstream 2.0kb upstream 5267 true Chr02: 28565470-28570736 Phaseolus vulgaris
Phvul.002G139800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28565470-28567469 Phaseolus vulgaris
Phvul.002G139800 2.0kb downstream 2.0kb downstream 5267 true Chr02: 28567470-28572736 Phaseolus vulgaris
Phvul.002G139800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28570737-28572736 Phaseolus vulgaris
Phvul.002G139800 5.0kb upstream 5.0kb upstream 8267 true Chr02: 28562470-28570736 Phaseolus vulgaris
Phvul.002G139800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28562470-28567469 Phaseolus vulgaris
Phvul.002G139800 5.0kb downstream 5.0kb downstream 8267 true Chr02: 28567470-28575736 Phaseolus vulgaris
Phvul.002G139800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28570737-28575736 Phaseolus vulgaris
Phvul.002G139800 10.0kb upstream 10.0kb upstream 13267 true Chr02: 28557470-28570736 Phaseolus vulgaris
Phvul.002G139800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28557470-28567469 Phaseolus vulgaris
Phvul.002G139800 10.0kb downstream 10.0kb downstream 13267 true Chr02: 28567470-28580736 Phaseolus vulgaris
Phvul.002G139800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28570737-28580736 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300416 5265 Fabidae View MSA
124068758 5270 Rosid View MSA
123751002 5271 Pentapetalae View MSA
122793414 5272 Eudicot View MSA
122043784 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 98.2306 0.0 262.361 High High
cufflinks 47.8702 0.0 123.809 High  
cufflinks 24.3929 0.0 63.8254    
cufflinks 34.8305 0.0 90.2289 High  
cufflinks 31.1621 0.0 80.9322    
cufflinks 20.9279 0.0 55.3916    
cufflinks 22.9223 0.0 60.4833    
cufflinks 13.8923 0.0 37.9434   Low
cufflinks 24.6732 0.0 64.882    
cufflinks 63.366 0.0 165.028 High High
cufflinks 20.5131 0.0 54.4771    

0 Strain