Gene : Phvul.002G139001 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12526//PTHR12526:SF382 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1425
Name:  ? Phvul.002G139001 Secondary Identifier:  ? PAC:37176919
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G139001 0.5kb upstream 0.5kb upstream 21100 true Chr02: 28969897-28990996 Phaseolus vulgaris
Phvul.002G139001 0.5kb upstream 0.5kb upstream 500 false Chr02: 28990497-28990996 Phaseolus vulgaris
Phvul.002G139001 0.5kb downstream 0.5kb downstream 21100 true Chr02: 28969397-28990496 Phaseolus vulgaris
Phvul.002G139001 0.5kb downstream 0.5kb downstream 500 false Chr02: 28969397-28969896 Phaseolus vulgaris
Phvul.002G139001 1.0kb upstream 1.0kb upstream 21600 true Chr02: 28969897-28991496 Phaseolus vulgaris
Phvul.002G139001 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28990497-28991496 Phaseolus vulgaris
Phvul.002G139001 1.0kb downstream 1.0kb downstream 21600 true Chr02: 28968897-28990496 Phaseolus vulgaris
Phvul.002G139001 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28968897-28969896 Phaseolus vulgaris
Phvul.002G139001 2.0kb upstream 2.0kb upstream 22600 true Chr02: 28969897-28992496 Phaseolus vulgaris
Phvul.002G139001 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28990497-28992496 Phaseolus vulgaris
Phvul.002G139001 2.0kb downstream 2.0kb downstream 22600 true Chr02: 28967897-28990496 Phaseolus vulgaris
Phvul.002G139001 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28967897-28969896 Phaseolus vulgaris
Phvul.002G139001 5.0kb upstream 5.0kb upstream 25600 true Chr02: 28969897-28995496 Phaseolus vulgaris
Phvul.002G139001 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28990497-28995496 Phaseolus vulgaris
Phvul.002G139001 5.0kb downstream 5.0kb downstream 25600 true Chr02: 28964897-28990496 Phaseolus vulgaris
Phvul.002G139001 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28964897-28969896 Phaseolus vulgaris
Phvul.002G139001 10.0kb upstream 10.0kb upstream 30600 true Chr02: 28969897-29000496 Phaseolus vulgaris
Phvul.002G139001 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28990497-29000496 Phaseolus vulgaris
Phvul.002G139001 10.0kb downstream 10.0kb downstream 30600 true Chr02: 28959897-28990496 Phaseolus vulgaris
Phvul.002G139001 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28959897-28969896 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301372 5265 Fabidae View MSA
124071806 5270 Rosid View MSA
123751940 5271 Pentapetalae View MSA
122774263 5272 Eudicot View MSA
122049203 5273 Angiosperm View MSA
121349172 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.40724 0.0 9.95088    
cufflinks 4.58783 0.0 13.0031    
cufflinks 12.756 0.0 33.3148   High
cufflinks 1.9766 0.0 6.2087   Low
cufflinks 3.99776 0.0 11.6008    
cufflinks 6.90112 0.0 18.847   High
cufflinks 1.88349 0.0 5.909   Low
cufflinks 2.57926 0.0 7.73775    
cufflinks 2.67687 0.0 8.08541    
cufflinks 4.90037 0.0 13.813    
cufflinks 2.93313 0.0 8.79702    

0 Strain