Gene : Phvul.002G139100 P. vulgaris v2.1
Defline:  (1 of 2) K15193 - protein SPT2 (SPTY2D1, SPT2) Genomic Order:  1426
Name:  ? Phvul.002G139100 Secondary Identifier:  ? PAC:37177072
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G139100 0.5kb upstream 0.5kb upstream 5973 true Chr02: 28992277-28998249 Phaseolus vulgaris
Phvul.002G139100 0.5kb upstream 0.5kb upstream 500 false Chr02: 28997750-28998249 Phaseolus vulgaris
Phvul.002G139100 0.5kb downstream 0.5kb downstream 5973 true Chr02: 28991777-28997749 Phaseolus vulgaris
Phvul.002G139100 0.5kb downstream 0.5kb downstream 500 false Chr02: 28991777-28992276 Phaseolus vulgaris
Phvul.002G139100 1.0kb upstream 1.0kb upstream 6473 true Chr02: 28992277-28998749 Phaseolus vulgaris
Phvul.002G139100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28997750-28998749 Phaseolus vulgaris
Phvul.002G139100 1.0kb downstream 1.0kb downstream 6473 true Chr02: 28991277-28997749 Phaseolus vulgaris
Phvul.002G139100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28991277-28992276 Phaseolus vulgaris
Phvul.002G139100 2.0kb upstream 2.0kb upstream 7473 true Chr02: 28992277-28999749 Phaseolus vulgaris
Phvul.002G139100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28997750-28999749 Phaseolus vulgaris
Phvul.002G139100 2.0kb downstream 2.0kb downstream 7473 true Chr02: 28990277-28997749 Phaseolus vulgaris
Phvul.002G139100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28990277-28992276 Phaseolus vulgaris
Phvul.002G139100 5.0kb upstream 5.0kb upstream 10473 true Chr02: 28992277-29002749 Phaseolus vulgaris
Phvul.002G139100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28997750-29002749 Phaseolus vulgaris
Phvul.002G139100 5.0kb downstream 5.0kb downstream 10473 true Chr02: 28987277-28997749 Phaseolus vulgaris
Phvul.002G139100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28987277-28992276 Phaseolus vulgaris
Phvul.002G139100 10.0kb upstream 10.0kb upstream 15473 true Chr02: 28992277-29007749 Phaseolus vulgaris
Phvul.002G139100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28997750-29007749 Phaseolus vulgaris
Phvul.002G139100 10.0kb downstream 10.0kb downstream 15473 true Chr02: 28982277-28997749 Phaseolus vulgaris
Phvul.002G139100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28982277-28992276 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299938 5265 Fabidae View MSA
124067077 5270 Rosid View MSA
123739599 5271 Pentapetalae View MSA
122790641 5272 Eudicot View MSA
122048073 5273 Angiosperm View MSA
121347399 5274 Embryophyte View MSA
123427511 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.94198 0.0 32.9319    
cufflinks 7.93355 0.0 24.8702    
cufflinks 7.46565 0.0 27.7669    
cufflinks 5.3226 0.0 18.2564   Low
cufflinks 5.6403 0.0 22.8354   Low
cufflinks 6.71035 0.0 28.4464    
cufflinks 8.75041 0.0 31.6182    
cufflinks 9.04875 0.0 35.7199    
cufflinks 8.53486 0.0 31.161    
cufflinks 12.1001 0.0 45.9575   High
cufflinks 5.77349 0.0 19.7375   Low

0 Strain