Gene : Phvul.002G142100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24089:SF341 - MITOCHONDRIAL CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN Genomic Order:  1419
Name:  ? Phvul.002G142100 Secondary Identifier:  ? PAC:37177291
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G142100 0.5kb upstream 0.5kb upstream 4192 true Chr02: 28883564-28887755 Phaseolus vulgaris
Phvul.002G142100 0.5kb upstream 0.5kb upstream 500 false Chr02: 28887256-28887755 Phaseolus vulgaris
Phvul.002G142100 0.5kb downstream 0.5kb downstream 4192 true Chr02: 28883064-28887255 Phaseolus vulgaris
Phvul.002G142100 0.5kb downstream 0.5kb downstream 500 false Chr02: 28883064-28883563 Phaseolus vulgaris
Phvul.002G142100 1.0kb upstream 1.0kb upstream 4692 true Chr02: 28883564-28888255 Phaseolus vulgaris
Phvul.002G142100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28887256-28888255 Phaseolus vulgaris
Phvul.002G142100 1.0kb downstream 1.0kb downstream 4692 true Chr02: 28882564-28887255 Phaseolus vulgaris
Phvul.002G142100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28882564-28883563 Phaseolus vulgaris
Phvul.002G142100 2.0kb upstream 2.0kb upstream 5692 true Chr02: 28883564-28889255 Phaseolus vulgaris
Phvul.002G142100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28887256-28889255 Phaseolus vulgaris
Phvul.002G142100 2.0kb downstream 2.0kb downstream 5692 true Chr02: 28881564-28887255 Phaseolus vulgaris
Phvul.002G142100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28881564-28883563 Phaseolus vulgaris
Phvul.002G142100 5.0kb upstream 5.0kb upstream 8692 true Chr02: 28883564-28892255 Phaseolus vulgaris
Phvul.002G142100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28887256-28892255 Phaseolus vulgaris
Phvul.002G142100 5.0kb downstream 5.0kb downstream 8692 true Chr02: 28878564-28887255 Phaseolus vulgaris
Phvul.002G142100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28878564-28883563 Phaseolus vulgaris
Phvul.002G142100 10.0kb upstream 10.0kb upstream 13692 true Chr02: 28883564-28897255 Phaseolus vulgaris
Phvul.002G142100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28887256-28897255 Phaseolus vulgaris
Phvul.002G142100 10.0kb downstream 10.0kb downstream 13692 true Chr02: 28873564-28887255 Phaseolus vulgaris
Phvul.002G142100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28873564-28883563 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311394 5265 Fabidae View MSA
124065581 5270 Rosid View MSA
123738655 5271 Pentapetalae View MSA
122791854 5272 Eudicot View MSA
122045796 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349185 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.021 0.0 59.8539    
cufflinks 23.2808 0.0 75.6356    
cufflinks 70.9625 0.0 246.863 High High
cufflinks 31.3031 0.0 101.469    
cufflinks 28.7079 0.0 91.9973    
cufflinks 37.0128 0.0 121.086 High  
cufflinks 11.5435 0.0 40.5571   Low
cufflinks 16.3967 0.0 54.8896    
cufflinks 16.8345 0.0 56.5089    
cufflinks 12.6292 0.0 44.0384   Low
cufflinks 30.3051 0.0 97.5769    

0 Strain