Gene : Phvul.002G128000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Genomic Order:  1281
Name:  ? Phvul.002G128000 Secondary Identifier:  ? PAC:37176160
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G128000 0.5kb upstream 0.5kb upstream 3123 true Chr02: 27041412-27044534 Phaseolus vulgaris
Phvul.002G128000 0.5kb upstream 0.5kb upstream 500 false Chr02: 27044035-27044534 Phaseolus vulgaris
Phvul.002G128000 0.5kb downstream 0.5kb downstream 3123 true Chr02: 27040912-27044034 Phaseolus vulgaris
Phvul.002G128000 0.5kb downstream 0.5kb downstream 500 false Chr02: 27040912-27041411 Phaseolus vulgaris
Phvul.002G128000 1.0kb upstream 1.0kb upstream 3623 true Chr02: 27041412-27045034 Phaseolus vulgaris
Phvul.002G128000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27044035-27045034 Phaseolus vulgaris
Phvul.002G128000 1.0kb downstream 1.0kb downstream 3623 true Chr02: 27040412-27044034 Phaseolus vulgaris
Phvul.002G128000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27040412-27041411 Phaseolus vulgaris
Phvul.002G128000 2.0kb upstream 2.0kb upstream 4623 true Chr02: 27041412-27046034 Phaseolus vulgaris
Phvul.002G128000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27044035-27046034 Phaseolus vulgaris
Phvul.002G128000 2.0kb downstream 2.0kb downstream 4623 true Chr02: 27039412-27044034 Phaseolus vulgaris
Phvul.002G128000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27039412-27041411 Phaseolus vulgaris
Phvul.002G128000 5.0kb upstream 5.0kb upstream 7623 true Chr02: 27041412-27049034 Phaseolus vulgaris
Phvul.002G128000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27044035-27049034 Phaseolus vulgaris
Phvul.002G128000 5.0kb downstream 5.0kb downstream 7623 true Chr02: 27036412-27044034 Phaseolus vulgaris
Phvul.002G128000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27036412-27041411 Phaseolus vulgaris
Phvul.002G128000 10.0kb upstream 10.0kb upstream 12623 true Chr02: 27041412-27054034 Phaseolus vulgaris
Phvul.002G128000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27044035-27054034 Phaseolus vulgaris
Phvul.002G128000 10.0kb downstream 10.0kb downstream 12623 true Chr02: 27031412-27044034 Phaseolus vulgaris
Phvul.002G128000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27031412-27041411 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301788 5265 Fabidae View MSA
124069812 5270 Rosid View MSA
123742789 5271 Pentapetalae View MSA
122791655 5272 Eudicot View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.95824 0.0 35.166   Low
cufflinks 13.9648 0.0 58.4512    
cufflinks 18.5678 0.0 75.4259    
cufflinks 7.11757 0.0 29.9698   Low
cufflinks 27.5659 0.0 118.294   High
cufflinks 17.5392 0.0 73.5198    
cufflinks 21.0322 0.0 94.9889    
cufflinks 14.7515 0.0 64.1737    
cufflinks 23.2228 0.0 105.472    
cufflinks 23.313 0.0 104.891    
cufflinks 24.9885 0.0 117.122    

0 Strain