Gene : Phvul.002G127600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21596//PTHR21596:SF8 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Genomic Order:  1277
Name:  ? Phvul.002G127600 Secondary Identifier:  ? PAC:37177809
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G127600 0.5kb upstream 0.5kb upstream 5689 true Chr02: 26985245-26990933 Phaseolus vulgaris
Phvul.002G127600 0.5kb upstream 0.5kb upstream 500 false Chr02: 26985245-26985744 Phaseolus vulgaris
Phvul.002G127600 0.5kb downstream 0.5kb downstream 5689 true Chr02: 26985745-26991433 Phaseolus vulgaris
Phvul.002G127600 0.5kb downstream 0.5kb downstream 500 false Chr02: 26990934-26991433 Phaseolus vulgaris
Phvul.002G127600 1.0kb upstream 1.0kb upstream 6189 true Chr02: 26984745-26990933 Phaseolus vulgaris
Phvul.002G127600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26984745-26985744 Phaseolus vulgaris
Phvul.002G127600 1.0kb downstream 1.0kb downstream 6189 true Chr02: 26985745-26991933 Phaseolus vulgaris
Phvul.002G127600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26990934-26991933 Phaseolus vulgaris
Phvul.002G127600 2.0kb upstream 2.0kb upstream 7189 true Chr02: 26983745-26990933 Phaseolus vulgaris
Phvul.002G127600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26983745-26985744 Phaseolus vulgaris
Phvul.002G127600 2.0kb downstream 2.0kb downstream 7189 true Chr02: 26985745-26992933 Phaseolus vulgaris
Phvul.002G127600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26990934-26992933 Phaseolus vulgaris
Phvul.002G127600 5.0kb upstream 5.0kb upstream 10189 true Chr02: 26980745-26990933 Phaseolus vulgaris
Phvul.002G127600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26980745-26985744 Phaseolus vulgaris
Phvul.002G127600 5.0kb downstream 5.0kb downstream 10189 true Chr02: 26985745-26995933 Phaseolus vulgaris
Phvul.002G127600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26990934-26995933 Phaseolus vulgaris
Phvul.002G127600 10.0kb upstream 10.0kb upstream 15189 true Chr02: 26975745-26990933 Phaseolus vulgaris
Phvul.002G127600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26975745-26985744 Phaseolus vulgaris
Phvul.002G127600 10.0kb downstream 10.0kb downstream 15189 true Chr02: 26985745-27000933 Phaseolus vulgaris
Phvul.002G127600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26990934-27000933 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049496 5273 Angiosperm View MSA
122309419 5265 Fabidae View MSA
124066774 5270 Rosid View MSA
123739600 5271 Pentapetalae View MSA
122788271 5272 Eudicot View MSA
121311438 5274 Embryophyte View MSA
123348734 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.7527 0.0 10.2199    
cufflinks 8.8264 0.0 26.8505    
cufflinks 15.113 0.0 43.6697   High
cufflinks 16.2435 0.0 51.8839   High
cufflinks 2.94364 0.0 11.4084    
cufflinks 14.5257 0.0 41.6313   High
cufflinks 1.70563 0.0 7.08681   Low
cufflinks 2.5045 0.0 9.59038    
cufflinks 2.01488 0.0 8.11668    
cufflinks 2.44548 0.0 9.57505    
cufflinks 3.86396 0.0 13.0624    

0 Strain