Gene : Phvul.002G131500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Genomic Order:  1317
Name:  ? Phvul.002G131500 Secondary Identifier:  ? PAC:37175347
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G131500 0.5kb upstream 0.5kb upstream 7688 true Chr02: 27548177-27555864 Phaseolus vulgaris
Phvul.002G131500 0.5kb upstream 0.5kb upstream 500 false Chr02: 27555365-27555864 Phaseolus vulgaris
Phvul.002G131500 0.5kb downstream 0.5kb downstream 7688 true Chr02: 27547677-27555364 Phaseolus vulgaris
Phvul.002G131500 0.5kb downstream 0.5kb downstream 500 false Chr02: 27547677-27548176 Phaseolus vulgaris
Phvul.002G131500 1.0kb upstream 1.0kb upstream 8188 true Chr02: 27548177-27556364 Phaseolus vulgaris
Phvul.002G131500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27555365-27556364 Phaseolus vulgaris
Phvul.002G131500 1.0kb downstream 1.0kb downstream 8188 true Chr02: 27547177-27555364 Phaseolus vulgaris
Phvul.002G131500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27547177-27548176 Phaseolus vulgaris
Phvul.002G131500 2.0kb upstream 2.0kb upstream 9188 true Chr02: 27548177-27557364 Phaseolus vulgaris
Phvul.002G131500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27555365-27557364 Phaseolus vulgaris
Phvul.002G131500 2.0kb downstream 2.0kb downstream 9188 true Chr02: 27546177-27555364 Phaseolus vulgaris
Phvul.002G131500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27546177-27548176 Phaseolus vulgaris
Phvul.002G131500 5.0kb upstream 5.0kb upstream 12188 true Chr02: 27548177-27560364 Phaseolus vulgaris
Phvul.002G131500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27555365-27560364 Phaseolus vulgaris
Phvul.002G131500 5.0kb downstream 5.0kb downstream 12188 true Chr02: 27543177-27555364 Phaseolus vulgaris
Phvul.002G131500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27543177-27548176 Phaseolus vulgaris
Phvul.002G131500 10.0kb upstream 10.0kb upstream 17188 true Chr02: 27548177-27565364 Phaseolus vulgaris
Phvul.002G131500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27555365-27565364 Phaseolus vulgaris
Phvul.002G131500 10.0kb downstream 10.0kb downstream 17188 true Chr02: 27538177-27555364 Phaseolus vulgaris
Phvul.002G131500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27538177-27548176 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253873 5265 Fabidae View MSA
123996281 5270 Rosid View MSA
123570782 5271 Pentapetalae View MSA
122605516 5272 Eudicot View MSA
122046038 5273 Angiosperm View MSA
121349129 5274 Embryophyte View MSA
123381183 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.278278 0.0 3.11099 Low Low
cufflinks 1.79608 0.0 9.31159    
cufflinks 2.2007 0.0 12.5825    
cufflinks 0.527941 0.0 4.04565 Low Low
cufflinks 1.38542 0.0 8.69882    
cufflinks 2.3891 0.0 15.0225   High
cufflinks 1.54977 0.0 7.80049    
cufflinks 0.877246 0.0 4.6183    
cufflinks 1.47629 0.0 7.78131    
cufflinks 1.14055 0.0 7.05466    
cufflinks 1.72841 0.0 12.916    

0 Strain