Gene : Phvul.002G131900 P. vulgaris v2.1
Defline:  (1 of 9) PTHR16007 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  1321
Name:  ? Phvul.002G131900 Secondary Identifier:  ? PAC:37175489
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G131900 0.5kb upstream 0.5kb upstream 3959 true Chr02: 27582554-27586512 Phaseolus vulgaris
Phvul.002G131900 0.5kb upstream 0.5kb upstream 500 false Chr02: 27586013-27586512 Phaseolus vulgaris
Phvul.002G131900 0.5kb downstream 0.5kb downstream 3959 true Chr02: 27582054-27586012 Phaseolus vulgaris
Phvul.002G131900 0.5kb downstream 0.5kb downstream 500 false Chr02: 27582054-27582553 Phaseolus vulgaris
Phvul.002G131900 1.0kb upstream 1.0kb upstream 4459 true Chr02: 27582554-27587012 Phaseolus vulgaris
Phvul.002G131900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27586013-27587012 Phaseolus vulgaris
Phvul.002G131900 1.0kb downstream 1.0kb downstream 4459 true Chr02: 27581554-27586012 Phaseolus vulgaris
Phvul.002G131900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27581554-27582553 Phaseolus vulgaris
Phvul.002G131900 2.0kb upstream 2.0kb upstream 5459 true Chr02: 27582554-27588012 Phaseolus vulgaris
Phvul.002G131900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27586013-27588012 Phaseolus vulgaris
Phvul.002G131900 2.0kb downstream 2.0kb downstream 5459 true Chr02: 27580554-27586012 Phaseolus vulgaris
Phvul.002G131900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27580554-27582553 Phaseolus vulgaris
Phvul.002G131900 5.0kb upstream 5.0kb upstream 8459 true Chr02: 27582554-27591012 Phaseolus vulgaris
Phvul.002G131900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27586013-27591012 Phaseolus vulgaris
Phvul.002G131900 5.0kb downstream 5.0kb downstream 8459 true Chr02: 27577554-27586012 Phaseolus vulgaris
Phvul.002G131900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27577554-27582553 Phaseolus vulgaris
Phvul.002G131900 10.0kb upstream 10.0kb upstream 13459 true Chr02: 27582554-27596012 Phaseolus vulgaris
Phvul.002G131900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27586013-27596012 Phaseolus vulgaris
Phvul.002G131900 10.0kb downstream 10.0kb downstream 13459 true Chr02: 27572554-27586012 Phaseolus vulgaris
Phvul.002G131900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27572554-27582553 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299440 5265 Fabidae View MSA
124050453 5270 Rosid View MSA
123737519 5271 Pentapetalae View MSA
122787957 5272 Eudicot View MSA
122047488 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0937 0.0 32.9363   High
cufflinks 5.15462 0.0 15.2917    
cufflinks 1.5485 0.0 5.24865   Low
cufflinks 12.3537 0.0 33.8297   High
cufflinks 4.28142 0.0 13.0441    
cufflinks 2.50036 0.0 8.06392   Low
cufflinks 3.56594 0.0 11.0859    
cufflinks 4.43719 0.0 13.3707    
cufflinks 7.01654 0.0 20.2927    
cufflinks 10.4167 0.0 28.8021   High
cufflinks 4.42237 0.0 13.4285    

0 Strain