Gene : Phvul.002G133000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR13018:SF47 - ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  1332
Name:  ? Phvul.002G133000 Secondary Identifier:  ? PAC:37175528
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G133000 0.5kb upstream 0.5kb upstream 7267 true Chr02: 27678020-27685286 Phaseolus vulgaris
Phvul.002G133000 0.5kb upstream 0.5kb upstream 500 false Chr02: 27684787-27685286 Phaseolus vulgaris
Phvul.002G133000 0.5kb downstream 0.5kb downstream 7267 true Chr02: 27677520-27684786 Phaseolus vulgaris
Phvul.002G133000 0.5kb downstream 0.5kb downstream 500 false Chr02: 27677520-27678019 Phaseolus vulgaris
Phvul.002G133000 1.0kb upstream 1.0kb upstream 7767 true Chr02: 27678020-27685786 Phaseolus vulgaris
Phvul.002G133000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27684787-27685786 Phaseolus vulgaris
Phvul.002G133000 1.0kb downstream 1.0kb downstream 7767 true Chr02: 27677020-27684786 Phaseolus vulgaris
Phvul.002G133000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27677020-27678019 Phaseolus vulgaris
Phvul.002G133000 2.0kb upstream 2.0kb upstream 8767 true Chr02: 27678020-27686786 Phaseolus vulgaris
Phvul.002G133000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27684787-27686786 Phaseolus vulgaris
Phvul.002G133000 2.0kb downstream 2.0kb downstream 8767 true Chr02: 27676020-27684786 Phaseolus vulgaris
Phvul.002G133000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27676020-27678019 Phaseolus vulgaris
Phvul.002G133000 5.0kb upstream 5.0kb upstream 11767 true Chr02: 27678020-27689786 Phaseolus vulgaris
Phvul.002G133000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27684787-27689786 Phaseolus vulgaris
Phvul.002G133000 5.0kb downstream 5.0kb downstream 11767 true Chr02: 27673020-27684786 Phaseolus vulgaris
Phvul.002G133000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27673020-27678019 Phaseolus vulgaris
Phvul.002G133000 10.0kb upstream 10.0kb upstream 16767 true Chr02: 27678020-27694786 Phaseolus vulgaris
Phvul.002G133000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27684787-27694786 Phaseolus vulgaris
Phvul.002G133000 10.0kb downstream 10.0kb downstream 16767 true Chr02: 27668020-27684786 Phaseolus vulgaris
Phvul.002G133000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27668020-27678019 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306761 5265 Fabidae View MSA
124064866 5270 Rosid View MSA
123745735 5271 Pentapetalae View MSA
122788976 5272 Eudicot View MSA
122046937 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.67057 0.0 15.6826    
cufflinks 4.50967 0.0 12.7513    
cufflinks 7.28215 0.0 19.6233    
cufflinks 3.08233 0.0 9.06508    
cufflinks 2.47134 0.0 7.47513   Low
cufflinks 9.42895 0.0 25.0322    
cufflinks 7.15958 0.0 19.4616    
cufflinks 22.6909 0.0 58.7024   High
cufflinks 7.38215 0.0 20.0445    
cufflinks 16.4702 0.0 42.652   High
cufflinks 2.06624 0.0 6.40396   Low

0 Strain