Gene : Phvul.002G132000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 Genomic Order:  1322
Name:  ? Phvul.002G132000 Secondary Identifier:  ? PAC:37177468
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G132000 0.5kb upstream 0.5kb upstream 18247 true Chr02: 27591350-27609596 Phaseolus vulgaris
Phvul.002G132000 0.5kb upstream 0.5kb upstream 500 false Chr02: 27591350-27591849 Phaseolus vulgaris
Phvul.002G132000 0.5kb downstream 0.5kb downstream 18247 true Chr02: 27591850-27610096 Phaseolus vulgaris
Phvul.002G132000 0.5kb downstream 0.5kb downstream 500 false Chr02: 27609597-27610096 Phaseolus vulgaris
Phvul.002G132000 1.0kb upstream 1.0kb upstream 18747 true Chr02: 27590850-27609596 Phaseolus vulgaris
Phvul.002G132000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 27590850-27591849 Phaseolus vulgaris
Phvul.002G132000 1.0kb downstream 1.0kb downstream 18747 true Chr02: 27591850-27610596 Phaseolus vulgaris
Phvul.002G132000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 27609597-27610596 Phaseolus vulgaris
Phvul.002G132000 2.0kb upstream 2.0kb upstream 19747 true Chr02: 27589850-27609596 Phaseolus vulgaris
Phvul.002G132000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 27589850-27591849 Phaseolus vulgaris
Phvul.002G132000 2.0kb downstream 2.0kb downstream 19747 true Chr02: 27591850-27611596 Phaseolus vulgaris
Phvul.002G132000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 27609597-27611596 Phaseolus vulgaris
Phvul.002G132000 5.0kb upstream 5.0kb upstream 22747 true Chr02: 27586850-27609596 Phaseolus vulgaris
Phvul.002G132000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 27586850-27591849 Phaseolus vulgaris
Phvul.002G132000 5.0kb downstream 5.0kb downstream 22747 true Chr02: 27591850-27614596 Phaseolus vulgaris
Phvul.002G132000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 27609597-27614596 Phaseolus vulgaris
Phvul.002G132000 10.0kb upstream 10.0kb upstream 27747 true Chr02: 27581850-27609596 Phaseolus vulgaris
Phvul.002G132000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 27581850-27591849 Phaseolus vulgaris
Phvul.002G132000 10.0kb downstream 10.0kb downstream 27747 true Chr02: 27591850-27619596 Phaseolus vulgaris
Phvul.002G132000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 27609597-27619596 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305465 5265 Fabidae View MSA
124064878 5270 Rosid View MSA
123737179 5271 Pentapetalae View MSA
122789263 5272 Eudicot View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3354 0.0 47.5462    
cufflinks 16.5039 0.0 42.6923    
cufflinks 18.5275 0.0 48.0173    
cufflinks 11.2135 0.0 29.1164   Low
cufflinks 17.1944 0.0 44.486    
cufflinks 16.5425 0.0 42.7899    
cufflinks 30.1084 0.0 79.9247 High High
cufflinks 30.7001 0.0 81.6648 High High
cufflinks 30.7097 0.0 81.4406 High High
cufflinks 34.442 0.0 92.2989   High
cufflinks 16.6997 0.0 43.198    

0 Strain