Gene : Phvul.002G119401 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31669:SF54 - PROTEIN FAR1-RELATED SEQUENCE 5 Genomic Order:  1195
Name:  ? Phvul.002G119401 Secondary Identifier:  ? PAC:37174605
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G119401 0.5kb upstream 0.5kb upstream 4059 true Chr02: 25453247-25457305 Phaseolus vulgaris
Phvul.002G119401 0.5kb upstream 0.5kb upstream 500 false Chr02: 25453247-25453746 Phaseolus vulgaris
Phvul.002G119401 0.5kb downstream 0.5kb downstream 4059 true Chr02: 25453747-25457805 Phaseolus vulgaris
Phvul.002G119401 0.5kb downstream 0.5kb downstream 500 false Chr02: 25457306-25457805 Phaseolus vulgaris
Phvul.002G119401 1.0kb upstream 1.0kb upstream 4559 true Chr02: 25452747-25457305 Phaseolus vulgaris
Phvul.002G119401 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25452747-25453746 Phaseolus vulgaris
Phvul.002G119401 1.0kb downstream 1.0kb downstream 4559 true Chr02: 25453747-25458305 Phaseolus vulgaris
Phvul.002G119401 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25457306-25458305 Phaseolus vulgaris
Phvul.002G119401 2.0kb upstream 2.0kb upstream 5559 true Chr02: 25451747-25457305 Phaseolus vulgaris
Phvul.002G119401 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25451747-25453746 Phaseolus vulgaris
Phvul.002G119401 2.0kb downstream 2.0kb downstream 5559 true Chr02: 25453747-25459305 Phaseolus vulgaris
Phvul.002G119401 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25457306-25459305 Phaseolus vulgaris
Phvul.002G119401 5.0kb upstream 5.0kb upstream 8559 true Chr02: 25448747-25457305 Phaseolus vulgaris
Phvul.002G119401 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25448747-25453746 Phaseolus vulgaris
Phvul.002G119401 5.0kb downstream 5.0kb downstream 8559 true Chr02: 25453747-25462305 Phaseolus vulgaris
Phvul.002G119401 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25457306-25462305 Phaseolus vulgaris
Phvul.002G119401 10.0kb upstream 10.0kb upstream 13559 true Chr02: 25443747-25457305 Phaseolus vulgaris
Phvul.002G119401 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25443747-25453746 Phaseolus vulgaris
Phvul.002G119401 10.0kb downstream 10.0kb downstream 13559 true Chr02: 25453747-25467305 Phaseolus vulgaris
Phvul.002G119401 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25457306-25467305 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307055 5265 Fabidae View MSA
124070617 5270 Rosid View MSA
123627925 5271 Pentapetalae View MSA
122796628 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01304 0.0 3.28683   Low
cufflinks 1.75944 0.0 5.36488    
cufflinks 3.01136 0.0 8.61288   High
cufflinks 1.19546 0.0 3.84944    
cufflinks 2.74671 0.0 8.02059   High
cufflinks 1.92075 0.0 5.78544    
cufflinks 1.374 0.0 4.3151    
cufflinks 1.67744 0.0 5.11532    
cufflinks 1.13886 0.0 3.66318   Low
cufflinks 1.83599 0.0 5.5764    
cufflinks 1.75856 0.0 5.40114    

0 Strain