Gene : Phvul.002G122300 P. vulgaris v2.1
Defline:  (1 of 1) K12400 - AP-4 complex subunit epsilon-1 (AP4E1) Genomic Order:  1224
Name:  ? Phvul.002G122300 Secondary Identifier:  ? PAC:37175399
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G122300 0.5kb upstream 0.5kb upstream 13257 true Chr02: 26011893-26025149 Phaseolus vulgaris
Phvul.002G122300 0.5kb upstream 0.5kb upstream 500 false Chr02: 26024650-26025149 Phaseolus vulgaris
Phvul.002G122300 0.5kb downstream 0.5kb downstream 13257 true Chr02: 26011393-26024649 Phaseolus vulgaris
Phvul.002G122300 0.5kb downstream 0.5kb downstream 500 false Chr02: 26011393-26011892 Phaseolus vulgaris
Phvul.002G122300 1.0kb upstream 1.0kb upstream 13757 true Chr02: 26011893-26025649 Phaseolus vulgaris
Phvul.002G122300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26024650-26025649 Phaseolus vulgaris
Phvul.002G122300 1.0kb downstream 1.0kb downstream 13757 true Chr02: 26010893-26024649 Phaseolus vulgaris
Phvul.002G122300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26010893-26011892 Phaseolus vulgaris
Phvul.002G122300 2.0kb upstream 2.0kb upstream 14757 true Chr02: 26011893-26026649 Phaseolus vulgaris
Phvul.002G122300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26024650-26026649 Phaseolus vulgaris
Phvul.002G122300 2.0kb downstream 2.0kb downstream 14757 true Chr02: 26009893-26024649 Phaseolus vulgaris
Phvul.002G122300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26009893-26011892 Phaseolus vulgaris
Phvul.002G122300 5.0kb upstream 5.0kb upstream 17757 true Chr02: 26011893-26029649 Phaseolus vulgaris
Phvul.002G122300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26024650-26029649 Phaseolus vulgaris
Phvul.002G122300 5.0kb downstream 5.0kb downstream 17757 true Chr02: 26006893-26024649 Phaseolus vulgaris
Phvul.002G122300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26006893-26011892 Phaseolus vulgaris
Phvul.002G122300 10.0kb upstream 10.0kb upstream 22757 true Chr02: 26011893-26034649 Phaseolus vulgaris
Phvul.002G122300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26024650-26034649 Phaseolus vulgaris
Phvul.002G122300 10.0kb downstream 10.0kb downstream 22757 true Chr02: 26001893-26024649 Phaseolus vulgaris
Phvul.002G122300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26001893-26011892 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304348 5265 Fabidae View MSA
124067026 5270 Rosid View MSA
123751016 5271 Pentapetalae View MSA
122788074 5272 Eudicot View MSA
122045484 5273 Angiosperm View MSA
121344174 5274 Embryophyte View MSA
123427678 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.17467 0.0 23.8803   Low
cufflinks 20.1611 0.0 52.4687    
cufflinks 16.5417 0.0 42.8242    
cufflinks 15.5731 0.0 40.2783    
cufflinks 19.8439 0.0 51.5533    
cufflinks 17.3979 0.0 45.0887    
cufflinks 17.3771 0.0 45.0427    
cufflinks 15.7807 0.0 40.8385    
cufflinks 22.9216 0.0 59.9694    
cufflinks 26.5745 0.0 70.0905   High
cufflinks 20.1051 0.0 52.2631    

0 Strain