Gene : Phvul.002G121600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22990 - F-BOX ONLY PROTEIN Genomic Order:  1217
Name:  ? Phvul.002G121600 Secondary Identifier:  ? PAC:37175166
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G121600 0.5kb upstream 0.5kb upstream 3670 true Chr02: 25877884-25881553 Phaseolus vulgaris
Phvul.002G121600 0.5kb upstream 0.5kb upstream 500 false Chr02: 25877884-25878383 Phaseolus vulgaris
Phvul.002G121600 0.5kb downstream 0.5kb downstream 3670 true Chr02: 25878384-25882053 Phaseolus vulgaris
Phvul.002G121600 0.5kb downstream 0.5kb downstream 500 false Chr02: 25881554-25882053 Phaseolus vulgaris
Phvul.002G121600 1.0kb upstream 1.0kb upstream 4170 true Chr02: 25877384-25881553 Phaseolus vulgaris
Phvul.002G121600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25877384-25878383 Phaseolus vulgaris
Phvul.002G121600 1.0kb downstream 1.0kb downstream 4170 true Chr02: 25878384-25882553 Phaseolus vulgaris
Phvul.002G121600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25881554-25882553 Phaseolus vulgaris
Phvul.002G121600 2.0kb upstream 2.0kb upstream 5170 true Chr02: 25876384-25881553 Phaseolus vulgaris
Phvul.002G121600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25876384-25878383 Phaseolus vulgaris
Phvul.002G121600 2.0kb downstream 2.0kb downstream 5170 true Chr02: 25878384-25883553 Phaseolus vulgaris
Phvul.002G121600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25881554-25883553 Phaseolus vulgaris
Phvul.002G121600 5.0kb upstream 5.0kb upstream 8170 true Chr02: 25873384-25881553 Phaseolus vulgaris
Phvul.002G121600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25873384-25878383 Phaseolus vulgaris
Phvul.002G121600 5.0kb downstream 5.0kb downstream 8170 true Chr02: 25878384-25886553 Phaseolus vulgaris
Phvul.002G121600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25881554-25886553 Phaseolus vulgaris
Phvul.002G121600 10.0kb upstream 10.0kb upstream 13170 true Chr02: 25868384-25881553 Phaseolus vulgaris
Phvul.002G121600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25868384-25878383 Phaseolus vulgaris
Phvul.002G121600 10.0kb downstream 10.0kb downstream 13170 true Chr02: 25878384-25891553 Phaseolus vulgaris
Phvul.002G121600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25881554-25891553 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041271 5273 Angiosperm View MSA
122307369 5265 Fabidae View MSA
124064461 5270 Rosid View MSA
123751585 5271 Pentapetalae View MSA
122789418 5272 Eudicot View MSA
121344604 5274 Embryophyte View MSA
123428680 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2847 0.0 30.216   High
cufflinks 7.94415 0.0 21.957    
cufflinks 8.98053 0.0 24.5258    
cufflinks 9.57594 0.0 26.1572    
cufflinks 6.86608 0.0 19.306    
cufflinks 5.44766 0.0 15.5732   Low
cufflinks 6.42861 0.0 18.0921    
cufflinks 6.85588 0.0 19.1584    
cufflinks 5.6065 0.0 16.0201   Low
cufflinks 12.557 0.0 33.4422   High
cufflinks 7.76269 0.0 21.5715    

0 Strain