Gene : Phvul.002G113500 P. vulgaris v2.1
Defline:  (1 of 5) PTHR31851:SF6 - VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 Genomic Order:  1135
Name:  ? Phvul.002G113500 Secondary Identifier:  ? PAC:37175421
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G113500 0.5kb upstream 0.5kb upstream 1277 true Chr02: 24369929-24371205 Phaseolus vulgaris
Phvul.002G113500 0.5kb upstream 0.5kb upstream 500 false Chr02: 24369929-24370428 Phaseolus vulgaris
Phvul.002G113500 0.5kb downstream 0.5kb downstream 1277 true Chr02: 24370429-24371705 Phaseolus vulgaris
Phvul.002G113500 0.5kb downstream 0.5kb downstream 500 false Chr02: 24371206-24371705 Phaseolus vulgaris
Phvul.002G113500 1.0kb upstream 1.0kb upstream 1777 true Chr02: 24369429-24371205 Phaseolus vulgaris
Phvul.002G113500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24369429-24370428 Phaseolus vulgaris
Phvul.002G113500 1.0kb downstream 1.0kb downstream 1777 true Chr02: 24370429-24372205 Phaseolus vulgaris
Phvul.002G113500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24371206-24372205 Phaseolus vulgaris
Phvul.002G113500 2.0kb upstream 2.0kb upstream 2777 true Chr02: 24368429-24371205 Phaseolus vulgaris
Phvul.002G113500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24368429-24370428 Phaseolus vulgaris
Phvul.002G113500 2.0kb downstream 2.0kb downstream 2777 true Chr02: 24370429-24373205 Phaseolus vulgaris
Phvul.002G113500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24371206-24373205 Phaseolus vulgaris
Phvul.002G113500 5.0kb upstream 5.0kb upstream 5777 true Chr02: 24365429-24371205 Phaseolus vulgaris
Phvul.002G113500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24365429-24370428 Phaseolus vulgaris
Phvul.002G113500 5.0kb downstream 5.0kb downstream 5777 true Chr02: 24370429-24376205 Phaseolus vulgaris
Phvul.002G113500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24371206-24376205 Phaseolus vulgaris
Phvul.002G113500 10.0kb upstream 10.0kb upstream 10777 true Chr02: 24360429-24371205 Phaseolus vulgaris
Phvul.002G113500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24360429-24370428 Phaseolus vulgaris
Phvul.002G113500 10.0kb downstream 10.0kb downstream 10777 true Chr02: 24370429-24381205 Phaseolus vulgaris
Phvul.002G113500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24371206-24381205 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310812 5265 Fabidae View MSA
124070442 5270 Rosid View MSA
123753376 5271 Pentapetalae View MSA
122797490 5272 Eudicot View MSA
122043714 5273 Angiosperm View MSA
121351711 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.519667 0.0 2.06901    
cufflinks 0.650665 0.0 2.53741    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0959724 0.0 0.445805 Low Low
cufflinks 6.18954 0.0 19.5068   High
cufflinks 0.193761 0.0 0.836065 Low  
cufflinks 1.61036 0.0 5.82663    
cufflinks 0.237724 0.0 1.00234 Low  
cufflinks 0.540292 0.0 2.13817    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.54228 0.0 5.62207    

0 Strain