Gene : Phvul.002G115600 P. vulgaris v2.1
Defline:  (1 of 4) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  1156
Name:  ? Phvul.002G115600 Secondary Identifier:  ? PAC:37175978
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6368 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G115600 0.5kb upstream 0.5kb upstream 11794 true Chr02: 24735675-24747468 Phaseolus vulgaris
Phvul.002G115600 0.5kb upstream 0.5kb upstream 500 false Chr02: 24735675-24736174 Phaseolus vulgaris
Phvul.002G115600 0.5kb downstream 0.5kb downstream 11794 true Chr02: 24736175-24747968 Phaseolus vulgaris
Phvul.002G115600 0.5kb downstream 0.5kb downstream 500 false Chr02: 24747469-24747968 Phaseolus vulgaris
Phvul.002G115600 1.0kb upstream 1.0kb upstream 12294 true Chr02: 24735175-24747468 Phaseolus vulgaris
Phvul.002G115600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24735175-24736174 Phaseolus vulgaris
Phvul.002G115600 1.0kb downstream 1.0kb downstream 12294 true Chr02: 24736175-24748468 Phaseolus vulgaris
Phvul.002G115600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24747469-24748468 Phaseolus vulgaris
Phvul.002G115600 2.0kb upstream 2.0kb upstream 13294 true Chr02: 24734175-24747468 Phaseolus vulgaris
Phvul.002G115600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24734175-24736174 Phaseolus vulgaris
Phvul.002G115600 2.0kb downstream 2.0kb downstream 13294 true Chr02: 24736175-24749468 Phaseolus vulgaris
Phvul.002G115600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24747469-24749468 Phaseolus vulgaris
Phvul.002G115600 5.0kb upstream 5.0kb upstream 16294 true Chr02: 24731175-24747468 Phaseolus vulgaris
Phvul.002G115600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24731175-24736174 Phaseolus vulgaris
Phvul.002G115600 5.0kb downstream 5.0kb downstream 16294 true Chr02: 24736175-24752468 Phaseolus vulgaris
Phvul.002G115600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24747469-24752468 Phaseolus vulgaris
Phvul.002G115600 10.0kb upstream 10.0kb upstream 21294 true Chr02: 24726175-24747468 Phaseolus vulgaris
Phvul.002G115600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24726175-24736174 Phaseolus vulgaris
Phvul.002G115600 10.0kb downstream 10.0kb downstream 21294 true Chr02: 24736175-24757468 Phaseolus vulgaris
Phvul.002G115600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24747469-24757468 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307611 5265 Fabidae View MSA
124069154 5270 Rosid View MSA
123751013 5271 Pentapetalae View MSA
122793710 5272 Eudicot View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7458 0.0 37.1807   Low
cufflinks 14.6016 0.0 41.9004    
cufflinks 12.0615 0.0 39.7829   Low
cufflinks 23.969 0.0 69.3494   High
cufflinks 15.1456 0.0 48.7857    
cufflinks 15.0807 0.0 48.2699    
cufflinks 16.8339 0.0 53.9184    
cufflinks 14.4814 0.0 41.4656    
cufflinks 19.4919 0.0 64.2118   High
cufflinks 13.3357 0.0 43.124    
cufflinks 18.8411 0.0 54.1066    

0 Strain