Gene : Phvul.002G116900 P. vulgaris v2.1
Defline:  (1 of 1) K08739 - DNA mismatch repair protein MLH3 (MLH3) Genomic Order:  1171
Name:  ? Phvul.002G116900 Secondary Identifier:  ? PAC:37177412
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G116900 0.5kb upstream 0.5kb upstream 10553 true Chr02: 24974745-24985297 Phaseolus vulgaris
Phvul.002G116900 0.5kb upstream 0.5kb upstream 500 false Chr02: 24984798-24985297 Phaseolus vulgaris
Phvul.002G116900 0.5kb downstream 0.5kb downstream 10553 true Chr02: 24974245-24984797 Phaseolus vulgaris
Phvul.002G116900 0.5kb downstream 0.5kb downstream 500 false Chr02: 24974245-24974744 Phaseolus vulgaris
Phvul.002G116900 1.0kb upstream 1.0kb upstream 11053 true Chr02: 24974745-24985797 Phaseolus vulgaris
Phvul.002G116900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24984798-24985797 Phaseolus vulgaris
Phvul.002G116900 1.0kb downstream 1.0kb downstream 11053 true Chr02: 24973745-24984797 Phaseolus vulgaris
Phvul.002G116900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24973745-24974744 Phaseolus vulgaris
Phvul.002G116900 2.0kb upstream 2.0kb upstream 12053 true Chr02: 24974745-24986797 Phaseolus vulgaris
Phvul.002G116900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24984798-24986797 Phaseolus vulgaris
Phvul.002G116900 2.0kb downstream 2.0kb downstream 12053 true Chr02: 24972745-24984797 Phaseolus vulgaris
Phvul.002G116900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24972745-24974744 Phaseolus vulgaris
Phvul.002G116900 5.0kb upstream 5.0kb upstream 15053 true Chr02: 24974745-24989797 Phaseolus vulgaris
Phvul.002G116900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24984798-24989797 Phaseolus vulgaris
Phvul.002G116900 5.0kb downstream 5.0kb downstream 15053 true Chr02: 24969745-24984797 Phaseolus vulgaris
Phvul.002G116900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24969745-24974744 Phaseolus vulgaris
Phvul.002G116900 10.0kb upstream 10.0kb upstream 20053 true Chr02: 24974745-24994797 Phaseolus vulgaris
Phvul.002G116900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24984798-24994797 Phaseolus vulgaris
Phvul.002G116900 10.0kb downstream 10.0kb downstream 20053 true Chr02: 24964745-24984797 Phaseolus vulgaris
Phvul.002G116900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24964745-24974744 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026337 5273 Angiosperm View MSA
122251074 5265 Fabidae Singleton cluster - no MSA
124064440 5270 Rosid View MSA
123740384 5271 Pentapetalae View MSA
122793914 5272 Eudicot View MSA
121346649 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156976 0.0 0.725732 Low Low
cufflinks 0.586101 0.0 2.90262    
cufflinks 0.561242 0.0 2.10981 Low  
cufflinks 0.244018 0.0 1.11438 Low Low
cufflinks 0.490469 0.0 2.02804 Low  
cufflinks 0.795006 0.0 3.55887    
cufflinks 1.59715 0.0 6.52502   High
cufflinks 1.46715 0.0 5.58653   High
cufflinks 1.04666 0.0 3.47345    
cufflinks 1.26958 0.0 5.11417    
cufflinks 0.226748 0.0 1.04894 Low Low

0 Strain